Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
BRCA2P51587 AC009120.2-204ENST00000621548 2032 ntBASIC6.96□□□□□ -1.3
BRCA2P51587 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
BRCA2P51587 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC6.96□□□□□ -1.3
BRCA2P51587 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
BRCA2P51587 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
BRCA2P51587 AC026464.2-201ENST00000567834 2421 ntBASIC6.96□□□□□ -1.3
BRCA2P51587 RAB28P1-201ENST00000411517 641 ntBASIC6.96□□□□□ -1.3
BRCA2P51587 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.96□□□□□ -1.3
BRCA2P51587 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.96□□□□□ -1.3
BRCA2P51587 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.96□□□□□ -1.3
BRCA2P51587 AL136131.3-201ENST00000607600 188 ntBASIC6.96□□□□□ -1.3
BRCA2P51587 AC021766.1-201ENST00000624404 741 ntBASIC6.96□□□□□ -1.3
BRCA2P51587 AP000550.3-201ENST00000637734 379 ntBASIC6.96□□□□□ -1.3
BRCA2P51587 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.96□□□□□ -1.3
BRCA2P51587 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.96□□□□□ -1.3
BRCA2P51587 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
BRCA2P51587 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.96□□□□□ -1.3
BRCA2P51587 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
BRCA2P51587 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
BRCA2P51587 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
BRCA2P51587 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.95□□□□□ -1.3
BRCA2P51587 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.95□□□□□ -1.3
BRCA2P51587 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 PTGS1-202ENST00000362012 4964 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC6.95□□□□□ -1.3
BRCA2P51587 RNU1-49P-201ENST00000363468 159 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.95□□□□□ -1.3
BRCA2P51587 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.95□□□□□ -1.3
BRCA2P51587 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.95□□□□□ -1.3
BRCA2P51587 RN7SL269P-201ENST00000467795 305 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.95□□□□□ -1.3
BRCA2P51587 MIR4697-201ENST00000582977 78 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 RNF138P2-201ENST00000603490 592 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 AC022106.1-201ENST00000612834 766 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.95□□□□□ -1.3
BRCA2P51587 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC6.95□□□□□ -1.3
BRCA2P51587 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC6.95□□□□□ -1.3
BRCA2P51587 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
BRCA2P51587 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 MEIS2-202ENST00000338564 4829 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 MEIS2-222ENST00000561208 4822 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
BRCA2P51587 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
BRCA2P51587 SYT17-202ENST00000562034 5092 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 CTBP1-AS2-206ENST00000581398 5652 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.95□□□□□ -1.3
BRCA2P51587 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 GLRXP3-201ENST00000470810 321 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.95□□□□□ -1.3
BRCA2P51587 AC090616.1-201ENST00000583895 447 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.95□□□□□ -1.3
BRCA2P51587 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
BRCA2P51587 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
BRCA2P51587 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC6.95□□□□□ -1.3
BRCA2P51587 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
BRCA2P51587 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.95□□□□□ -1.3
BRCA2P51587 CEACAMP10-202ENST00000495431 496 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 CR383656.6-201ENST00000550518 394 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 AC131009.3-201ENST00000621809 287 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 AC119674.1-201ENST00000641611 1210 ntBASIC6.95□□□□□ -1.3
BRCA2P51587 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BRCA2P51587 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
BRCA2P51587 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 AL662795.2-201ENST00000624252 3706 ntBASIC6.94□□□□□ -1.3
BRCA2P51587 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
BRCA2P51587 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.94□□□□□ -1.3
BRCA2P51587 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.94□□□□□ -1.3
BRCA2P51587 HMGN2P6-201ENST00000551091 273 ntBASIC6.94□□□□□ -1.3
BRCA2P51587 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.94□□□□□ -1.3
BRCA2P51587 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.94□□□□□ -1.3
BRCA2P51587 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 PDZK1P1-202ENST00000425209 1350 ntBASIC6.94□□□□□ -1.3
BRCA2P51587 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
BRCA2P51587 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.94□□□□□ -1.3
BRCA2P51587 RN7SL547P-201ENST00000490793 290 ntBASIC6.94□□□□□ -1.3
BRCA2P51587 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.94□□□□□ -1.3
BRCA2P51587 AF230666.2-201ENST00000602328 725 ntBASIC6.94□□□□□ -1.3
BRCA2P51587 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC6.94□□□□□ -1.3
BRCA2P51587 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
BRCA2P51587 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
BRCA2P51587 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BRCA2P51587 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms