Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SCARNA6-201ENST00000515982 265 ntBASIC5.78□□□□□ -1.48
HLA-DMAP28067 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DMAP28067 ATP5J2P4-201ENST00000538774 267 ntBASIC5.78□□□□□ -1.48
HLA-DMAP28067 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DMAP28067 SOX5-213ENST00000541847 758 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DMAP28067 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DMAP28067 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DMAP28067 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DMAP28067 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 OR7E94P-202ENST00000601375 790 ntBASIC5.78□□□□□ -1.48
HLA-DMAP28067 AC068234.2-201ENST00000619646 522 ntBASIC5.78□□□□□ -1.48
HLA-DMAP28067 MIR6723-201ENST00000621981 89 ntBASIC5.78□□□□□ -1.48
HLA-DMAP28067 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DMAP28067 AC093671.1-201ENST00000624981 2929 ntBASIC5.78□□□□□ -1.48
HLA-DMAP28067 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 AC119674.1-209ENST00000642031 997 ntBASIC5.78□□□□□ -1.48
HLA-DMAP28067 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DMAP28067 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DMAP28067 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HLA-DMAP28067 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.77□□□□□ -1.48
HLA-DMAP28067 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DMAP28067 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DMAP28067 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 SNORD15A-201ENST00000384214 148 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 NPM1P37-201ENST00000403105 874 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 RN7SKP168-201ENST00000410910 300 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC245452.2-201ENST00000435222 392 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AL390879.1-201ENST00000439143 386 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 RPSAP49-201ENST00000445182 886 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 SCDP1-201ENST00000455244 1081 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 PABPC1P10-201ENST00000464731 381 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 RN7SL58P-201ENST00000473445 294 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC127024.1-201ENST00000490847 418 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC079866.1-201ENST00000534985 1220 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DMAP28067 OOSP1P2-201ENST00000579644 351 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC027271.1-201ENST00000610270 610 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DMAP28067 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC005261.2-201ENST00000593427 4258 ntBASIC5.77□□□□□ -1.49
HLA-DMAP28067 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DMAP28067 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DMAP28067 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DMAP28067 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DMAP28067 AL132656.3-201ENST00000606384 1595 ntBASIC5.76□□□□□ -1.49
HLA-DMAP28067 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DMAP28067 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DMAP28067 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 OR2T4-202ENST00000366475 1047 ntBASIC5.76□□□□□ -1.49
HLA-DMAP28067 ARMCX7P-201ENST00000372828 562 ntBASIC5.76□□□□□ -1.49
HLA-DMAP28067 SLC25A5P7-201ENST00000406156 896 ntBASIC5.76□□□□□ -1.49
HLA-DMAP28067 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DMAP28067 AL161626.1-201ENST00000441480 490 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms