Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCL1P22362 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
CCL1P22362 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.74□□□□□ -1.49
CCL1P22362 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CCL1P22362 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCL1P22362 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CCL1P22362 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.73□□□□□ -1.49
CCL1P22362 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.73□□□□□ -1.49
CCL1P22362 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 RPL21P42-201ENST00000488408 464 ntBASIC5.73□□□□□ -1.49
CCL1P22362 AC010409.2-201ENST00000505780 478 ntBASIC5.73□□□□□ -1.49
CCL1P22362 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.73□□□□□ -1.49
CCL1P22362 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.73□□□□□ -1.49
CCL1P22362 RN7SKP242-201ENST00000515967 289 ntBASIC5.73□□□□□ -1.49
CCL1P22362 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.73□□□□□ -1.49
CCL1P22362 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.73□□□□□ -1.49
CCL1P22362 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 DIMT1P1-201ENST00000603970 763 ntBASIC5.73□□□□□ -1.49
CCL1P22362 MRPL57P3-201ENST00000619218 176 ntBASIC5.73□□□□□ -1.49
CCL1P22362 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.73□□□□□ -1.49
CCL1P22362 AC006328.2-201ENST00000623198 397 ntBASIC5.73□□□□□ -1.49
CCL1P22362 AC012005.2-201ENST00000624333 397 ntBASIC5.73□□□□□ -1.49
CCL1P22362 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCL1P22362 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 AL121936.2-201ENST00000641935 662 ntBASIC5.73□□□□□ -1.49
CCL1P22362 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 TMEM75-201ENST00000624314 2165 ntBASIC5.73□□□□□ -1.49
CCL1P22362 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 EPS15P1-202ENST00000459691 2071 ntBASIC5.73□□□□□ -1.49
CCL1P22362 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CCL1P22362 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.73□□□□□ -1.49
CCL1P22362 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCL1P22362 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCL1P22362 AC011504.1-201ENST00000623331 4103 ntBASIC5.72□□□□□ -1.49
CCL1P22362 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.72□□□□□ -1.49
CCL1P22362 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCL1P22362 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCL1P22362 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCL1P22362 AC018765.1-201ENST00000623357 3446 ntBASIC5.72□□□□□ -1.49
CCL1P22362 AC093844.1-201ENST00000514910 1361 ntBASIC5.72□□□□□ -1.49
CCL1P22362 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCL1P22362 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCL1P22362 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CCL1P22362 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.72□□□□□ -1.49
CCL1P22362 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCL1P22362 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCL1P22362 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.72□□□□□ -1.49
CCL1P22362 RNA5SP350-201ENST00000363298 111 ntBASIC5.72□□□□□ -1.49
CCL1P22362 AP003170.5-201ENST00000397185 335 ntBASIC5.72□□□□□ -1.49
CCL1P22362 RN7SKP30-201ENST00000411373 334 ntBASIC5.72□□□□□ -1.49
CCL1P22362 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCL1P22362 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.72□□□□□ -1.49
CCL1P22362 AC019185.3-201ENST00000438805 323 ntBASIC5.72□□□□□ -1.49
CCL1P22362 AL353803.3-201ENST00000444641 335 ntBASIC5.72□□□□□ -1.49
CCL1P22362 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.72□□□□□ -1.49
CCL1P22362 RPS4XP19-201ENST00000460237 736 ntBASIC5.72□□□□□ -1.49
CCL1P22362 RPSAP24-201ENST00000461543 873 ntBASIC5.72□□□□□ -1.49
CCL1P22362 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.72□□□□□ -1.49
CCL1P22362 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.72□□□□□ -1.49
CCL1P22362 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.72□□□□□ -1.49
CCL1P22362 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CCL1P22362 AL390198.2-201ENST00000510553 222 ntBASIC5.72□□□□□ -1.49
CCL1P22362 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.72□□□□□ -1.49
CCL1P22362 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.72□□□□□ -1.49
CCL1P22362 SETP17-201ENST00000534163 817 ntBASIC5.72□□□□□ -1.49
CCL1P22362 PSMC1P8-201ENST00000536820 1296 ntBASIC5.72□□□□□ -1.49
CCL1P22362 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.72□□□□□ -1.49
CCL1P22362 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.72□□□□□ -1.49
CCL1P22362 AL162632.2-201ENST00000553933 399 ntBASIC5.72□□□□□ -1.49
CCL1P22362 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.72□□□□□ -1.49
CCL1P22362 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCL1P22362 ANP32BP1-202ENST00000568553 737 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms