Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ERCC3P19447 FABP5P3-201ENST00000437960 408 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 MED6P1-201ENST00000439659 713 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC8.58□□□□□ -1.04
ERCC3P19447 EXOSC3P1-201ENST00000448649 500 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.58□□□□□ -1.04
ERCC3P19447 AC005517.1-201ENST00000452091 489 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 RSU1P1-201ENST00000453416 441 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 CTSLP6-201ENST00000458273 1002 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 RPSAP24-201ENST00000461543 873 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 CREM-224ENST00000468236 582 ntTSL 3 BASIC8.58□□□□□ -1.04
ERCC3P19447 RN7SL332P-201ENST00000482163 254 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 AC116562.1-201ENST00000485355 781 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ERCC3P19447 AC005412.2-201ENST00000492004 341 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 RPL10P7-201ENST00000495649 625 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC8.58□□□□□ -1.04
ERCC3P19447 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.58□□□□□ -1.04
ERCC3P19447 BTF3P1-201ENST00000522014 495 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC8.58□□□□□ -1.04
ERCC3P19447 OR8G5-201ENST00000524943 1041 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 AC130366.1-201ENST00000526505 1192 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC8.58□□□□□ -1.04
ERCC3P19447 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC8.58□□□□□ -1.04
ERCC3P19447 AC126323.4-201ENST00000566935 234 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 MRPS21P9-201ENST00000571150 257 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.58□□□□□ -1.04
ERCC3P19447 BNIP3P32-201ENST00000600015 554 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 AC073137.1-201ENST00000605636 634 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 AC005021.1-201ENST00000608730 355 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 AC009464.1-201ENST00000615731 469 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 AC005899.6-201ENST00000620729 297 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC8.58□□□□□ -1.04
ERCC3P19447 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
ERCC3P19447 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.58□□□□□ -1.04
ERCC3P19447 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
ERCC3P19447 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ERCC3P19447 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.58□□□□□ -1.04
ERCC3P19447 AC138627.1-203ENST00000641872 1680 ntBASIC8.58□□□□□ -1.04
ERCC3P19447 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
ERCC3P19447 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ERCC3P19447 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ERCC3P19447 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
ERCC3P19447 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
ERCC3P19447 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ERCC3P19447 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
ERCC3P19447 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.57□□□□□ -1.04
ERCC3P19447 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
ERCC3P19447 AL391262.1-201ENST00000556558 1992 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.57□□□□□ -1.04
ERCC3P19447 AC009948.5-201ENST00000624360 4406 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
ERCC3P19447 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
ERCC3P19447 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
ERCC3P19447 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.57□□□□□ -1.04
ERCC3P19447 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC8.57□□□□□ -1.04
ERCC3P19447 FO393414.1-201ENST00000428697 1184 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 CETN4P-201ENST00000432407 469 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.57□□□□□ -1.04
ERCC3P19447 DBIL5P2-201ENST00000443827 253 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 RPL7P33-201ENST00000444159 742 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 AL356133.1-201ENST00000444762 372 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 MTND1P33-201ENST00000446251 917 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.57□□□□□ -1.04
ERCC3P19447 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 TPT1P3-201ENST00000492841 512 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC8.57□□□□□ -1.04
ERCC3P19447 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC8.57□□□□□ -1.04
ERCC3P19447 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.57□□□□□ -1.04
ERCC3P19447 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 SNORA19.3-201ENST00000516165 130 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC8.57□□□□□ -1.04
ERCC3P19447 OR4A40P-201ENST00000533878 948 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 AC093524.1-201ENST00000564266 1094 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 AC091304.4-201ENST00000565703 620 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.57□□□□□ -1.04
ERCC3P19447 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.57□□□□□ -1.04
ERCC3P19447 UBA2-208ENST00000592791 910 ntTSL 2 BASIC8.57□□□□□ -1.04
ERCC3P19447 AC080112.3-201ENST00000612552 880 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.57□□□□□ -1.04
ERCC3P19447 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.57□□□□□ -1.04
ERCC3P19447 AC048341.3-201ENST00000619323 491 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 AC105105.5-201ENST00000622635 1294 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 SNORA43.5-201ENST00000631270 138 ntBASIC8.57□□□□□ -1.04
ERCC3P19447 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC8.57□□□□□ -1.04
ERCC3P19447 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
ERCC3P19447 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
ERCC3P19447 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
ERCC3P19447 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
ERCC3P19447 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms