Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.88□□□□□ -1.31
HMGA1P17096 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGA1P17096 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.88□□□□□ -1.31
HMGA1P17096 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HMGA1P17096 AC087392.3-202ENST00000358446 1754 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HMGA1P17096 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 ASNSP6-201ENST00000592770 1618 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 CAP1P2-201ENST00000417455 1409 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
HMGA1P17096 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 AC003045.1-201ENST00000398779 713 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 VN1R20P-201ENST00000425215 966 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 OR13C1P-201ENST00000457612 963 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 RN7SL834P-201ENST00000461450 286 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 RN7SL561P-201ENST00000488553 281 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.88□□□□□ -1.31
HMGA1P17096 AL162632.2-201ENST00000553933 399 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 MIR3154-201ENST00000577829 84 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGA1P17096 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGA1P17096 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 AC114546.4-201ENST00000624413 369 ntBASIC6.88□□□□□ -1.31
HMGA1P17096 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGA1P17096 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGA1P17096 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 MTCO1P25-201ENST00000414449 1799 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 AC022507.1-201ENST00000548349 1505 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGA1P17096 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
HMGA1P17096 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 AC004014.2-201ENST00000623718 5122 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 SNORD35A-201ENST00000363389 86 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 RNA5SP279-201ENST00000365513 117 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGA1P17096 YWHAZP4-201ENST00000392459 708 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 VN1R12P-201ENST00000403778 876 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGA1P17096 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 FABP5P1-201ENST00000423401 411 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGA1P17096 GAPDHP59-201ENST00000435908 267 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 AL138899.2-201ENST00000439139 499 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 AL390728.3-201ENST00000452704 270 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGA1P17096 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
HMGA1P17096 RPL23AP68-201ENST00000480924 445 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 AC005017.1-201ENST00000482002 490 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 RN7SL170P-201ENST00000487098 295 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 AC117395.1-201ENST00000487390 403 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.87□□□□□ -1.31
HMGA1P17096 RPL12P7-201ENST00000493832 494 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 RPL5P11-201ENST00000498068 893 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGA1P17096 AC112484.3-201ENST00000505910 329 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 RN7SKP70-201ENST00000516655 271 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGA1P17096 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGA1P17096 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGA1P17096 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGA1P17096 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGA1P17096 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.87□□□□□ -1.31
HMGA1P17096 MIR6721-201ENST00000617181 87 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGA1P17096 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGA1P17096 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGA1P17096 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HMGA1P17096 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGA1P17096 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGA1P17096 AC074141.1-201ENST00000588129 2995 ntBASIC6.87□□□□□ -1.31
HMGA1P17096 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGA1P17096 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGA1P17096 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HMGA1P17096 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms