Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 ATP5BP1-201ENST00000411980 1574 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.93□□□□□ -1.46
UBCP0CG48 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.93□□□□□ -1.46
UBCP0CG48 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
UBCP0CG48 U3.14-201ENST00000365363 227 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 RNA5SP177-201ENST00000410122 107 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.93□□□□□ -1.46
UBCP0CG48 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.93□□□□□ -1.46
UBCP0CG48 GAPDHP69-201ENST00000425504 1008 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 GYG1P2-201ENST00000426437 1006 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 AC007365.2-201ENST00000428806 458 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.93□□□□□ -1.46
UBCP0CG48 H3F3BP1-201ENST00000440551 403 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 SNX18P9-201ENST00000440580 835 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 AL451063.1-201ENST00000450164 1133 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 AL139156.3-201ENST00000454802 394 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.93□□□□□ -1.46
UBCP0CG48 GAPDHP53-201ENST00000458397 924 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 RPSAP48-201ENST00000466509 889 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 RN7SL145P-201ENST00000469955 296 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 RN7SL445P-201ENST00000495609 293 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 SNORA58-201ENST00000505219 137 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.93□□□□□ -1.46
UBCP0CG48 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC5.93□□□□□ -1.46
UBCP0CG48 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.93□□□□□ -1.46
UBCP0CG48 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.93□□□□□ -1.46
UBCP0CG48 NDUFA3P2-201ENST00000531434 232 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 DPPA3P2-202ENST00000557188 1219 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 MIR4262-201ENST00000578394 54 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 EIF4A3P1-201ENST00000578499 647 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 MIR5705-201ENST00000579870 89 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 AL034374.2-201ENST00000605281 548 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 AC018690.1-201ENST00000608144 626 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.93□□□□□ -1.46
UBCP0CG48 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
UBCP0CG48 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
UBCP0CG48 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
UBCP0CG48 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 KYNUP2-201ENST00000582280 1329 ntBASIC5.93□□□□□ -1.46
UBCP0CG48 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.93□□□□□ -1.46
UBCP0CG48 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBCP0CG48 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.92□□□□□ -1.46
UBCP0CG48 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBCP0CG48 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.92□□□□□ -1.46
UBCP0CG48 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.92□□□□□ -1.46
UBCP0CG48 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.92□□□□□ -1.46
UBCP0CG48 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBCP0CG48 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBCP0CG48 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
UBCP0CG48 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBCP0CG48 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBCP0CG48 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBCP0CG48 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBCP0CG48 AC068769.1-201ENST00000474767 2426 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBCP0CG48 RNA5SP188-201ENST00000362916 129 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 RNA5SP514-201ENST00000363717 111 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.92□□□□□ -1.46
UBCP0CG48 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.92□□□□□ -1.46
UBCP0CG48 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.92□□□□□ -1.46
UBCP0CG48 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.92□□□□□ -1.46
UBCP0CG48 AC245884.2-201ENST00000426257 404 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC5.92□□□□□ -1.46
UBCP0CG48 VDAC2P3-201ENST00000430995 828 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 ANXA2P2-201ENST00000435128 1020 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.92□□□□□ -1.46
UBCP0CG48 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.92□□□□□ -1.46
UBCP0CG48 TVP23CP1-201ENST00000450317 639 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 GOT2P2-201ENST00000450663 1251 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 AC128716.1-201ENST00000475129 166 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBCP0CG48 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.92□□□□□ -1.46
UBCP0CG48 SCARNA18.2-201ENST00000516882 84 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.92□□□□□ -1.46
UBCP0CG48 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
UBCP0CG48 NATP-201ENST00000523491 878 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 IGLV3-6-201ENST00000523937 250 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.92□□□□□ -1.46
UBCP0CG48 OR4A6P-201ENST00000534364 970 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.92□□□□□ -1.46
UBCP0CG48 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.92□□□□□ -1.46
UBCP0CG48 RN7SL270P-201ENST00000579643 281 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.92□□□□□ -1.46
UBCP0CG48 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.92□□□□□ -1.46
UBCP0CG48 AC005070.2-201ENST00000604391 260 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 AL031777.2-201ENST00000611953 196 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 AL352984.2-202ENST00000613699 155 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 pRNA.9-201ENST00000618609 89 ntBASIC5.92□□□□□ -1.46
UBCP0CG48 AL354718.1-201ENST00000619764 589 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 1555.4 ms