Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 KRT16P5-201ENST00000455284 522 ntBASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA9Q9Y5G4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGA9Q9Y5G4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHGA9Q9Y5G4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHGA9Q9Y5G4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA9Q9Y5G4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA9Q9Y5G4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA9Q9Y5G4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA9Q9Y5G4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGA9Q9Y5G4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 RCN1P1-201ENST00000400413 996 ntBASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 AL355355.2-201ENST00000442321 338 ntBASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 AP003071.4-201ENST00000562276 1284 ntBASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 AF186192.3-201ENST00000583427 947 ntBASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA9Q9Y5G4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 AL353708.3-201ENST00000610272 989 ntBASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA9Q9Y5G4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 HTR7P1-201ENST00000538670 1336 ntBASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms