Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSFQ9UBX1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSFQ9UBX1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSFQ9UBX1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CTSFQ9UBX1 NBPF21P-201ENST00000425093 1451 ntBASIC18.71■□□□□ 0.59
CTSFQ9UBX1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 RPS2P55-201ENST00000397318 883 ntBASIC18.71■□□□□ 0.59
CTSFQ9UBX1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 AC012618.2-201ENST00000428058 849 ntBASIC18.71■□□□□ 0.59
CTSFQ9UBX1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 SNORA78-201ENST00000459373 127 ntBASIC18.71■□□□□ 0.59
CTSFQ9UBX1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 AC107956.1-201ENST00000494359 873 ntBASIC18.71■□□□□ 0.59
CTSFQ9UBX1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSFQ9UBX1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CTSFQ9UBX1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 AC073314.1-201ENST00000568729 2216 ntBASIC18.7■□□□□ 0.58
CTSFQ9UBX1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTSFQ9UBX1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 KRT16P6-202ENST00000425692 1426 ntBASIC18.69■□□□□ 0.58
CTSFQ9UBX1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 AC233702.5-201ENST00000584107 538 ntBASIC18.69■□□□□ 0.58
CTSFQ9UBX1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms