Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 KRT16P6-202ENST00000425692 1426 ntBASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 TCF3P1-201ENST00000423021 1937 ntBASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 AC006557.6-201ENST00000623071 864 ntBASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KCMF1Q9P0J7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 UNC93B5-201ENST00000530315 699 ntBASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KCMF1Q9P0J7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
KCMF1Q9P0J7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KCMF1Q9P0J7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
KCMF1Q9P0J7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KCMF1Q9P0J7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
KCMF1Q9P0J7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.83■□□□□ 0.6
KCMF1Q9P0J7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.82■□□□□ 0.6
KCMF1Q9P0J7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.81■□□□□ 0.6
KCMF1Q9P0J7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCMF1Q9P0J7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.81■□□□□ 0.6
KCMF1Q9P0J7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCMF1Q9P0J7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCMF1Q9P0J7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCMF1Q9P0J7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.81■□□□□ 0.6
KCMF1Q9P0J7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KCMF1Q9P0J7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCMF1Q9P0J7 UNC93B4-201ENST00000505679 747 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms