Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.09■□□□□ 0.81
NCKIPSDQ9NZQ3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NCKIPSDQ9NZQ3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.08■□□□□ 0.81
NCKIPSDQ9NZQ3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCKIPSDQ9NZQ3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCKIPSDQ9NZQ3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCKIPSDQ9NZQ3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
NCKIPSDQ9NZQ3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCKIPSDQ9NZQ3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCKIPSDQ9NZQ3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCKIPSDQ9NZQ3 PNMA6B-201ENST00000538162 1200 ntBASIC20.08■□□□□ 0.81
NCKIPSDQ9NZQ3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCKIPSDQ9NZQ3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCKIPSDQ9NZQ3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCKIPSDQ9NZQ3 AC092368.3-202ENST00000574180 1591 ntBASIC20.08■□□□□ 0.8
NCKIPSDQ9NZQ3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCKIPSDQ9NZQ3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCKIPSDQ9NZQ3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NCKIPSDQ9NZQ3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NCKIPSDQ9NZQ3 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 AC116050.2-201ENST00000612102 1779 ntBASIC20.06■□□□□ 0.8
NCKIPSDQ9NZQ3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 AC007952.6-201ENST00000573168 2673 ntBASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 AC003957.1-201ENST00000625108 2673 ntBASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKIPSDQ9NZQ3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 MIR718-201ENST00000390190 70 ntBASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 PGM5P4-201ENST00000421970 445 ntBASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 AC008403.3-201ENST00000598924 454 ntBASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 AC105020.6-201ENST00000621523 1217 ntBASIC20.04■□□□□ 0.8
NCKIPSDQ9NZQ3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms