Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 UNC93B5-201ENST00000530315 699 ntBASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 KRT16P6-202ENST00000425692 1426 ntBASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PARPBPQ9NWS1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PARPBPQ9NWS1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PARPBPQ9NWS1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PARPBPQ9NWS1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PARPBPQ9NWS1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PARPBPQ9NWS1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PARPBPQ9NWS1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.75■□□□□ 0.43
PARPBPQ9NWS1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 LINC01521-201ENST00000504184 1943 ntBASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 AL157384.1-201ENST00000445995 2473 ntBASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 UNC93B4-201ENST00000505679 747 ntBASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 SMG8-203ENST00000578922 2178 ntBASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PARPBPQ9NWS1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms