Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 AC007322.4-201ENST00000509611 723 ntBASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 AC022517.1-201ENST00000592429 346 ntBASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 AC016405.3-201ENST00000607710 860 ntBASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 FAM21FP-204ENST00000608637 956 ntBASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CHRDL1Q9BU40 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.77■□□□□ 0.11
CHRDL1Q9BU40 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHRDL1Q9BU40 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.77■□□□□ 0.11
CHRDL1Q9BU40 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHRDL1Q9BU40 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHRDL1Q9BU40 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
CHRDL1Q9BU40 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 PCDHAC2-203ENST00000615316 3011 ntBASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 CNN2P6-201ENST00000439038 900 ntBASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 BID-214ENST00000617586 542 ntTSL 5 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 KRT8P36-201ENST00000489121 1440 ntBASIC15.76■□□□□ 0.11
CHRDL1Q9BU40 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 AL162377.1-201ENST00000618844 1793 ntBASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 AL020996.1-203ENST00000536896 2307 ntBASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRDL1Q9BU40 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 AL162412.1-201ENST00000567129 965 ntBASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 AC068338.2-201ENST00000563278 1430 ntBASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRDL1Q9BU40 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms