Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 KRT16P6-202ENST00000425692 1426 ntBASIC21.21■□□□□ 0.99
ZNF558Q96NG5 FSCN1P1-201ENST00000568912 1481 ntBASIC21.2■□□□□ 0.98
ZNF558Q96NG5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.2■□□□□ 0.98
ZNF558Q96NG5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 AC026271.3-201ENST00000571884 352 ntBASIC21.2■□□□□ 0.98
ZNF558Q96NG5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF558Q96NG5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 TERF1P1-201ENST00000311003 1181 ntBASIC21.19■□□□□ 0.98
ZNF558Q96NG5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 SLC25A3P1-201ENST00000443844 931 ntBASIC21.19■□□□□ 0.98
ZNF558Q96NG5 YBX1P10-201ENST00000444752 975 ntBASIC21.19■□□□□ 0.98
ZNF558Q96NG5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.19■□□□□ 0.98
ZNF558Q96NG5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ZNF558Q96NG5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF558Q96NG5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 MESTP1-201ENST00000404287 994 ntBASIC21.17■□□□□ 0.98
ZNF558Q96NG5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 TFP1-202ENST00000475455 1573 ntBASIC21.17■□□□□ 0.98
ZNF558Q96NG5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF558Q96NG5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.16■□□□□ 0.98
ZNF558Q96NG5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF558Q96NG5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ZNF558Q96NG5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms