Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00479Q96M42 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00479Q96M42 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00479Q96M42 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00479Q96M42 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00479Q96M42 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00479Q96M42 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00479Q96M42 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00479Q96M42 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00479Q96M42 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00479Q96M42 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00479Q96M42 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00479Q96M42 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00479Q96M42 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 KRT87P-202ENST00000534226 1464 ntBASIC15.16■□□□□ 0.02
LINC00479Q96M42 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00479Q96M42 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00479Q96M42 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 AC138907.5-202ENST00000569484 235 ntBASIC15.16■□□□□ 0.02
LINC00479Q96M42 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 TPRG1LP1-201ENST00000598702 760 ntBASIC15.16■□□□□ 0.02
LINC00479Q96M42 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00479Q96M42 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00479Q96M42 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00479Q96M42 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00479Q96M42 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00479Q96M42 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 AC079140.4-201ENST00000507448 529 ntBASIC15.15■□□□□ 0.02
LINC00479Q96M42 SLC7A5P2-201ENST00000553010 536 ntBASIC15.15■□□□□ 0.02
LINC00479Q96M42 AC012414.1-201ENST00000556676 535 ntBASIC15.15■□□□□ 0.02
LINC00479Q96M42 AC027682.1-201ENST00000562846 899 ntBASIC15.15■□□□□ 0.02
LINC00479Q96M42 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00479Q96M42 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00479Q96M42 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 LETM1P2-201ENST00000597330 2178 ntBASIC15.14■□□□□ 0.01
LINC00479Q96M42 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00479Q96M42 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LINC00479Q96M42 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00479Q96M42 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.14■□□□□ 0.01
LINC00479Q96M42 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC00479Q96M42 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00479Q96M42 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 AC005082.1-201ENST00000413042 2259 ntBASIC15.14■□□□□ 0.01
LINC00479Q96M42 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
LINC00479Q96M42 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LINC00479Q96M42 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC00479Q96M42 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00479Q96M42 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms