Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PHGDH-210ENST00000641115 1638 ntBASIC20.31■□□□□ 0.84
RTP4Q96DX8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTP4Q96DX8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.3■□□□□ 0.84
RTP4Q96DX8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTP4Q96DX8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.3■□□□□ 0.84
RTP4Q96DX8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RTP4Q96DX8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.29■□□□□ 0.84
RTP4Q96DX8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.29■□□□□ 0.84
RTP4Q96DX8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RTP4Q96DX8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 AC005332.7-201ENST00000614046 2005 ntBASIC20.29■□□□□ 0.84
RTP4Q96DX8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTP4Q96DX8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RTP4Q96DX8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RTP4Q96DX8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTP4Q96DX8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTP4Q96DX8 AC093484.2-201ENST00000580996 2166 ntBASIC20.28■□□□□ 0.84
RTP4Q96DX8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTP4Q96DX8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTP4Q96DX8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTP4Q96DX8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTP4Q96DX8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTP4Q96DX8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTP4Q96DX8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.28■□□□□ 0.84
RTP4Q96DX8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTP4Q96DX8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RTP4Q96DX8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTP4Q96DX8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTP4Q96DX8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTP4Q96DX8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTP4Q96DX8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTP4Q96DX8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTP4Q96DX8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTP4Q96DX8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RTP4Q96DX8 LSM12P1-201ENST00000411836 588 ntBASIC20.27■□□□□ 0.84
RTP4Q96DX8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.27■□□□□ 0.84
RTP4Q96DX8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTP4Q96DX8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTP4Q96DX8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.27■□□□□ 0.84
RTP4Q96DX8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTP4Q96DX8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RTP4Q96DX8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.27■□□□□ 0.83
RTP4Q96DX8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTP4Q96DX8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTP4Q96DX8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 AF201337.1-201ENST00000520239 748 ntBASIC20.26■□□□□ 0.83
RTP4Q96DX8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 CD99P1-205ENST00000527459 561 ntBASIC20.26■□□□□ 0.83
RTP4Q96DX8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTP4Q96DX8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTP4Q96DX8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTP4Q96DX8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RTP4Q96DX8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTP4Q96DX8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTP4Q96DX8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms