Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBGCP3Q96CW5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBGCP3Q96CW5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBGCP3Q96CW5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBGCP3Q96CW5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TUBGCP3Q96CW5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 AC016405.3-201ENST00000607710 860 ntBASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 AL020996.1-203ENST00000536896 2307 ntBASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 AP000974.1-201ENST00000623909 2387 ntBASIC19.25■□□□□ 0.67
TUBGCP3Q96CW5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 NTF6G-201ENST00000591094 616 ntBASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 PTBP1P-201ENST00000554374 1601 ntBASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms