Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 RPS2P52-201ENST00000469610 820 ntBASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 RNA5SP413-201ENST00000516373 109 ntBASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTHRC1Q96CG8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 AC018553.1-201ENST00000616682 1458 ntBASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 CD99P1-205ENST00000527459 561 ntBASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTHRC1Q96CG8 AC124283.5-201ENST00000624661 1809 ntBASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 AC125437.2-201ENST00000625180 2167 ntBASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 TFP1-202ENST00000475455 1573 ntBASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTHRC1Q96CG8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.46■□□□□ 0.54
CTHRC1Q96CG8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
CTHRC1Q96CG8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTHRC1Q96CG8 AFG3L1P-217ENST00000557444 2447 ntBASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 SLC25A24-204ENST00000569674 2357 ntBASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 POM121L13P-201ENST00000422362 380 ntBASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 AC026366.1-201ENST00000488803 879 ntBASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 AP003097.1-201ENST00000530657 1135 ntBASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms