Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CNOT9Q92600 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT9Q92600 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNOT9Q92600 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CNOT9Q92600 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CNOT9Q92600 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT9Q92600 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT9Q92600 TMEM179-206ENST00000616017 1645 ntBASIC18.31■□□□□ 0.52
CNOT9Q92600 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNOT9Q92600 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT9Q92600 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNOT9Q92600 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CNOT9Q92600 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNOT9Q92600 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT9Q92600 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT9Q92600 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT9Q92600 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT9Q92600 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.3■□□□□ 0.52
CNOT9Q92600 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CNOT9Q92600 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT9Q92600 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.3■□□□□ 0.52
CNOT9Q92600 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT9Q92600 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNOT9Q92600 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT9Q92600 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.3■□□□□ 0.52
CNOT9Q92600 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT9Q92600 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT9Q92600 KRT16P6-202ENST00000425692 1426 ntBASIC18.3■□□□□ 0.52
CNOT9Q92600 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNOT9Q92600 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT9Q92600 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT9Q92600 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.3■□□□□ 0.52
CNOT9Q92600 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNOT9Q92600 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT9Q92600 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CNOT9Q92600 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT9Q92600 GPX1P1-201ENST00000388829 606 ntBASIC18.29■□□□□ 0.52
CNOT9Q92600 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNOT9Q92600 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.29■□□□□ 0.52
CNOT9Q92600 NCF1B-203ENST00000435988 1254 ntBASIC18.29■□□□□ 0.52
CNOT9Q92600 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT9Q92600 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.29■□□□□ 0.52
CNOT9Q92600 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.29■□□□□ 0.52
CNOT9Q92600 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT9Q92600 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT9Q92600 AC023632.3-201ENST00000521633 145 ntBASIC18.29■□□□□ 0.52
CNOT9Q92600 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNOT9Q92600 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT9Q92600 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CNOT9Q92600 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.28■□□□□ 0.52
CNOT9Q92600 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CNOT9Q92600 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CNOT9Q92600 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 HLA-G-202ENST00000376815 851 ntBASIC18.28■□□□□ 0.52
CNOT9Q92600 HLA-G-203ENST00000376818 1127 ntBASIC18.28■□□□□ 0.52
CNOT9Q92600 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.28■□□□□ 0.52
CNOT9Q92600 GUSBP6-202ENST00000438529 1198 ntBASIC18.28■□□□□ 0.52
CNOT9Q92600 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT9Q92600 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CNOT9Q92600 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.28■□□□□ 0.52
CNOT9Q92600 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT9Q92600 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT9Q92600 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT9Q92600 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms