Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 TFP1-202ENST00000475455 1573 ntBASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH3RF3Q8TEJ3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 AP003071.4-201ENST00000562276 1284 ntBASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 AC073195.1-201ENST00000607241 877 ntBASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SH3RF3Q8TEJ3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 AP006587.1-201ENST00000534129 1502 ntBASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 AP002982.1-201ENST00000492365 877 ntBASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH3RF3Q8TEJ3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SH3RF3Q8TEJ3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3RF3Q8TEJ3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
SH3RF3Q8TEJ3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
SH3RF3Q8TEJ3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.64■■□□□ 1.38
SH3RF3Q8TEJ3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
SH3RF3Q8TEJ3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SH3RF3Q8TEJ3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SH3RF3Q8TEJ3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SH3RF3Q8TEJ3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
SH3RF3Q8TEJ3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SH3RF3Q8TEJ3 AL355355.2-201ENST00000442321 338 ntBASIC23.64■■□□□ 1.37
SH3RF3Q8TEJ3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
SH3RF3Q8TEJ3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.64■■□□□ 1.37
SH3RF3Q8TEJ3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.64■■□□□ 1.37
SH3RF3Q8TEJ3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms