Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 STARP1-201ENST00000397973 869 ntBASIC18.1■□□□□ 0.49
CHD6Q8TD26 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD6Q8TD26 AL121749.1-202ENST00000609313 2153 ntBASIC18.1■□□□□ 0.49
CHD6Q8TD26 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD6Q8TD26 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD6Q8TD26 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD6Q8TD26 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 CYMP-203ENST00000474680 1263 ntBASIC18.09■□□□□ 0.49
CHD6Q8TD26 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 AC012615.1-201ENST00000565797 1299 ntBASIC18.09■□□□□ 0.49
CHD6Q8TD26 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD6Q8TD26 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD6Q8TD26 AL645929.1-201ENST00000420084 975 ntBASIC18.09■□□□□ 0.49
CHD6Q8TD26 MFAP1P1-201ENST00000442257 1255 ntBASIC18.09■□□□□ 0.49
CHD6Q8TD26 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 AL356652.1-201ENST00000615962 565 ntBASIC18.09■□□□□ 0.49
CHD6Q8TD26 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CHD6Q8TD26 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHD6Q8TD26 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHD6Q8TD26 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHD6Q8TD26 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.08■□□□□ 0.49
CHD6Q8TD26 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.08■□□□□ 0.49
CHD6Q8TD26 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CHD6Q8TD26 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHD6Q8TD26 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.08■□□□□ 0.49
CHD6Q8TD26 AL773604.1-201ENST00000617417 272 ntBASIC18.08■□□□□ 0.49
CHD6Q8TD26 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHD6Q8TD26 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.08■□□□□ 0.49
CHD6Q8TD26 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.08■□□□□ 0.49
CHD6Q8TD26 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHD6Q8TD26 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CHD6Q8TD26 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CHD6Q8TD26 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD6Q8TD26 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.08■□□□□ 0.48
CHD6Q8TD26 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.08■□□□□ 0.48
CHD6Q8TD26 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.08■□□□□ 0.48
CHD6Q8TD26 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.08■□□□□ 0.48
CHD6Q8TD26 AC011498.5-201ENST00000592027 486 ntBASIC18.08■□□□□ 0.48
CHD6Q8TD26 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD6Q8TD26 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHD6Q8TD26 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD6Q8TD26 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD6Q8TD26 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD6Q8TD26 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD6Q8TD26 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD6Q8TD26 AC023632.3-201ENST00000521633 145 ntBASIC18.07■□□□□ 0.48
CHD6Q8TD26 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD6Q8TD26 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD6Q8TD26 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD6Q8TD26 AC004812.2-201ENST00000611079 2094 ntBASIC18.07■□□□□ 0.48
CHD6Q8TD26 HBZP1-201ENST00000354915 429 ntBASIC18.07■□□□□ 0.48
CHD6Q8TD26 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.07■□□□□ 0.48
CHD6Q8TD26 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD6Q8TD26 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD6Q8TD26 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD6Q8TD26 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD6Q8TD26 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD6Q8TD26 AC112907.2-201ENST00000448639 330 ntBASIC18.06■□□□□ 0.48
CHD6Q8TD26 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.06■□□□□ 0.48
CHD6Q8TD26 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD6Q8TD26 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD6Q8TD26 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms