Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 C2orf69P4-201ENST00000565394 541 ntBASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 AL031963.3-201ENST00000606441 850 ntBASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SMARCC2Q8TAQ2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMARCC2Q8TAQ2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 FAM201B-201ENST00000458407 597 ntBASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.28■■□□□ 1.32
SMARCC2Q8TAQ2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 AC060766.5-201ENST00000590539 871 ntBASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 HLA-B-256ENST00000639848 1089 ntBASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 AL158211.5-201ENST00000623583 2518 ntBASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMARCC2Q8TAQ2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
SMARCC2Q8TAQ2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.27■■□□□ 1.31
SMARCC2Q8TAQ2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.26■■□□□ 1.31
SMARCC2Q8TAQ2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms