Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 KRT18P57-201ENST00000443599 1254 ntBASIC15.52■□□□□ 0.08
LINC01006Q8NI28 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.52■□□□□ 0.08
LINC01006Q8NI28 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01006Q8NI28 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01006Q8NI28 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01006Q8NI28 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.52■□□□□ 0.07
LINC01006Q8NI28 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LINC01006Q8NI28 FSCN1P1-201ENST00000568912 1481 ntBASIC15.52■□□□□ 0.07
LINC01006Q8NI28 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01006Q8NI28 AC133561.1-201ENST00000568600 2415 ntBASIC15.52■□□□□ 0.07
LINC01006Q8NI28 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01006Q8NI28 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 AC116351.2-201ENST00000606540 1585 ntBASIC15.51■□□□□ 0.07
LINC01006Q8NI28 TERF1P1-201ENST00000311003 1181 ntBASIC15.51■□□□□ 0.07
LINC01006Q8NI28 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.51■□□□□ 0.07
LINC01006Q8NI28 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 AL445675.2-201ENST00000620291 557 ntBASIC15.51■□□□□ 0.07
LINC01006Q8NI28 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 KRT16P6-202ENST00000425692 1426 ntBASIC15.51■□□□□ 0.07
LINC01006Q8NI28 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01006Q8NI28 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 AF106564.1-201ENST00000607058 2553 ntBASIC15.5■□□□□ 0.07
LINC01006Q8NI28 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 TFP1-202ENST00000475455 1573 ntBASIC15.5■□□□□ 0.07
LINC01006Q8NI28 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 SLC25A3P1-201ENST00000443844 931 ntBASIC15.5■□□□□ 0.07
LINC01006Q8NI28 YBX1P10-201ENST00000444752 975 ntBASIC15.5■□□□□ 0.07
LINC01006Q8NI28 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 AC026271.3-201ENST00000571884 352 ntBASIC15.5■□□□□ 0.07
LINC01006Q8NI28 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC01006Q8NI28 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 MESTP1-201ENST00000404287 994 ntBASIC15.49■□□□□ 0.07
LINC01006Q8NI28 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms