Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 AC006970.2-201ENST00000450065 779 ntBASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 AC069236.1-201ENST00000604339 616 ntBASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 RAP2CP1-201ENST00000605103 478 ntBASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CFAP61Q8NHU2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 CROCCP5-201ENST00000436658 830 ntBASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 FAM21FP-204ENST00000608637 956 ntBASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CFAP61Q8NHU2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 RARRES2P4-201ENST00000514074 484 ntBASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 AC090192.1-201ENST00000517740 490 ntBASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 AL162412.1-201ENST00000567129 965 ntBASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CFAP61Q8NHU2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 AL050303.2-201ENST00000619798 666 ntBASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CFAP61Q8NHU2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms