Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.59■■□□□ 1.53
RTL9Q8NET4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTL9Q8NET4 KRT16P6-202ENST00000425692 1426 ntBASIC24.59■■□□□ 1.53
RTL9Q8NET4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.59■■□□□ 1.53
RTL9Q8NET4 AL355355.2-201ENST00000442321 338 ntBASIC24.59■■□□□ 1.53
RTL9Q8NET4 KSR1P1-201ENST00000446298 240 ntBASIC24.59■■□□□ 1.53
RTL9Q8NET4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.59■■□□□ 1.53
RTL9Q8NET4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC24.59■■□□□ 1.53
RTL9Q8NET4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.59■■□□□ 1.53
RTL9Q8NET4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC24.59■■□□□ 1.53
RTL9Q8NET4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RTL9Q8NET4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTL9Q8NET4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTL9Q8NET4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.59■■□□□ 1.53
RTL9Q8NET4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTL9Q8NET4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.58■■□□□ 1.53
RTL9Q8NET4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.58■■□□□ 1.53
RTL9Q8NET4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
RTL9Q8NET4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTL9Q8NET4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RTL9Q8NET4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
RTL9Q8NET4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTL9Q8NET4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
RTL9Q8NET4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
RTL9Q8NET4 YBX1P10-201ENST00000444752 975 ntBASIC24.57■■□□□ 1.52
RTL9Q8NET4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.57■■□□□ 1.52
RTL9Q8NET4 RN7SL850P-201ENST00000579959 291 ntBASIC24.57■■□□□ 1.52
RTL9Q8NET4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.57■■□□□ 1.52
RTL9Q8NET4 AL445228.2-201ENST00000605589 952 ntBASIC24.57■■□□□ 1.52
RTL9Q8NET4 REXO1L10P-201ENST00000615707 1290 ntBASIC24.57■■□□□ 1.52
RTL9Q8NET4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RTL9Q8NET4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTL9Q8NET4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTL9Q8NET4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTL9Q8NET4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.57■■□□□ 1.52
RTL9Q8NET4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTL9Q8NET4 AP006587.1-201ENST00000534129 1502 ntBASIC24.57■■□□□ 1.52
RTL9Q8NET4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTL9Q8NET4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.57■■□□□ 1.52
RTL9Q8NET4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.57■■□□□ 1.52
RTL9Q8NET4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.56■■□□□ 1.52
RTL9Q8NET4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTL9Q8NET4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.56■■□□□ 1.52
RTL9Q8NET4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.56■■□□□ 1.52
RTL9Q8NET4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
RTL9Q8NET4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RTL9Q8NET4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RTL9Q8NET4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC24.56■■□□□ 1.52
RTL9Q8NET4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.56■■□□□ 1.52
RTL9Q8NET4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTL9Q8NET4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTL9Q8NET4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTL9Q8NET4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTL9Q8NET4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RTL9Q8NET4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTL9Q8NET4 RBM17P1-201ENST00000453646 1190 ntBASIC24.55■■□□□ 1.52
RTL9Q8NET4 AC116562.2-201ENST00000507042 360 ntBASIC24.55■■□□□ 1.52
RTL9Q8NET4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC24.55■■□□□ 1.52
RTL9Q8NET4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTL9Q8NET4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.55■■□□□ 1.52
RTL9Q8NET4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RTL9Q8NET4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTL9Q8NET4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTL9Q8NET4 AC018553.1-201ENST00000616682 1458 ntBASIC24.55■■□□□ 1.52
RTL9Q8NET4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTL9Q8NET4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RTL9Q8NET4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.55■■□□□ 1.52
RTL9Q8NET4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.55■■□□□ 1.52
RTL9Q8NET4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RTL9Q8NET4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTL9Q8NET4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTL9Q8NET4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.54■■□□□ 1.52
RTL9Q8NET4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTL9Q8NET4 KRT18P16-201ENST00000510337 1294 ntBASIC24.54■■□□□ 1.52
RTL9Q8NET4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.54■■□□□ 1.52
RTL9Q8NET4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTL9Q8NET4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
RTL9Q8NET4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTL9Q8NET4 KRT16P1-201ENST00000399124 1418 ntBASIC24.54■■□□□ 1.52
RTL9Q8NET4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
RTL9Q8NET4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.54■■□□□ 1.52
RTL9Q8NET4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.54■■□□□ 1.52
RTL9Q8NET4 TMPOP1-202ENST00000424642 1267 ntBASIC24.54■■□□□ 1.52
RTL9Q8NET4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.54■■□□□ 1.52
RTL9Q8NET4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC24.54■■□□□ 1.52
RTL9Q8NET4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.53■■□□□ 1.52
RTL9Q8NET4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTL9Q8NET4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.53■■□□□ 1.52
RTL9Q8NET4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.53■■□□□ 1.52
RTL9Q8NET4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTL9Q8NET4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTL9Q8NET4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
RTL9Q8NET4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.53■■□□□ 1.52
RTL9Q8NET4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTL9Q8NET4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTL9Q8NET4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTL9Q8NET4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTL9Q8NET4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms