Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 DUX4L2-201ENST00000561772 1275 ntBASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 DUX4L6-201ENST00000626483 1275 ntBASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 DUX4L1-201ENST00000627662 1275 ntBASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 DUX4L8-201ENST00000629013 1275 ntBASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 DUX4L3-201ENST00000630187 1275 ntBASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 DUX4L7-201ENST00000630678 1275 ntBASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 DUX4L5-201ENST00000630834 1275 ntBASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 PBX2P1-201ENST00000493219 1291 ntBASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC71LQ8N9Z2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 AC105265.2-201ENST00000467189 838 ntBASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 AC091305.1-201ENST00000479476 895 ntBASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC71LQ8N9Z2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC71LQ8N9Z2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms