Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC33Q8N5R6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 AC099778.1-201ENST00000568593 1911 ntBASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 AL162377.1-201ENST00000618844 1793 ntBASIC20.85■□□□□ 0.93
CCDC33Q8N5R6 AFG3L1P-217ENST00000557444 2447 ntBASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 AC069544.1-201ENST00000609399 999 ntBASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC33Q8N5R6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC33Q8N5R6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC33Q8N5R6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC33Q8N5R6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CCDC33Q8N5R6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC33Q8N5R6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC33Q8N5R6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 MIR718-201ENST00000390190 70 ntBASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC33Q8N5R6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms