Protein–RNA interactions for Protein: Q6ZRR7

LRRC9, Leucine-rich repeat-containing protein 9, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9Q6ZRR7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
LRRC9Q6ZRR7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
LRRC9Q6ZRR7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC30.69■■■□□ 2.5
LRRC9Q6ZRR7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LRRC9Q6ZRR7 KRT18P16-201ENST00000510337 1294 ntBASIC30.69■■■□□ 2.5
LRRC9Q6ZRR7 NUDT16P1-203ENST00000513809 620 ntBASIC30.69■■■□□ 2.5
LRRC9Q6ZRR7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
LRRC9Q6ZRR7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 AP006587.1-201ENST00000534129 1502 ntBASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 FAM197Y1-201ENST00000421178 764 ntBASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LRRC9Q6ZRR7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 AC073195.1-201ENST00000607241 877 ntBASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
LRRC9Q6ZRR7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LRRC9Q6ZRR7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 AP003071.4-201ENST00000562276 1284 ntBASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 KRT17P2-201ENST00000300992 1314 ntBASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
LRRC9Q6ZRR7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 AL512408.1-201ENST00000569378 2000 ntBASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LRRC9Q6ZRR7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC30.64■■■□□ 2.49
LRRC9Q6ZRR7 AL162377.1-201ENST00000618844 1793 ntBASIC30.64■■■□□ 2.49
LRRC9Q6ZRR7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 GOLGA6L3-201ENST00000507199 1679 ntBASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC30.63■■■□□ 2.49
LRRC9Q6ZRR7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 REXO1L10P-201ENST00000615707 1290 ntBASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 REXO1L12P-201ENST00000622156 912 ntBASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC30.62■■■□□ 2.49
LRRC9Q6ZRR7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
LRRC9Q6ZRR7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
LRRC9Q6ZRR7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
LRRC9Q6ZRR7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms