Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF220Q5VTB9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF220Q5VTB9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RNF220Q5VTB9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF220Q5VTB9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
RNF220Q5VTB9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF220Q5VTB9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 DUX4L2-201ENST00000561772 1275 ntBASIC19.08■□□□□ 0.64
RNF220Q5VTB9 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 AC120498.10-201ENST00000621827 505 ntBASIC19.08■□□□□ 0.64
RNF220Q5VTB9 DUX4L6-201ENST00000626483 1275 ntBASIC19.08■□□□□ 0.64
RNF220Q5VTB9 DUX4L1-201ENST00000627662 1275 ntBASIC19.08■□□□□ 0.64
RNF220Q5VTB9 DUX4L8-201ENST00000629013 1275 ntBASIC19.08■□□□□ 0.64
RNF220Q5VTB9 DUX4L3-201ENST00000630187 1275 ntBASIC19.08■□□□□ 0.64
RNF220Q5VTB9 DUX4L7-201ENST00000630678 1275 ntBASIC19.08■□□□□ 0.64
RNF220Q5VTB9 DUX4L5-201ENST00000630834 1275 ntBASIC19.08■□□□□ 0.64
RNF220Q5VTB9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF220Q5VTB9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 AC011484.1-201ENST00000377652 1995 ntBASIC19.07■□□□□ 0.64
RNF220Q5VTB9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF220Q5VTB9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 CCDC92B-201ENST00000575506 885 ntBASIC19.06■□□□□ 0.64
RNF220Q5VTB9 AC104187.1-201ENST00000607510 612 ntBASIC19.06■□□□□ 0.64
RNF220Q5VTB9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF220Q5VTB9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 AC245052.3-201ENST00000450182 901 ntBASIC19.05■□□□□ 0.64
RNF220Q5VTB9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF220Q5VTB9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms