Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARS2Q5ST30 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARS2Q5ST30 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VARS2Q5ST30 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
VARS2Q5ST30 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.11■□□□□ 0.97
VARS2Q5ST30 FAM197Y1-201ENST00000421178 764 ntBASIC21.11■□□□□ 0.97
VARS2Q5ST30 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.11■□□□□ 0.97
VARS2Q5ST30 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.11■□□□□ 0.97
VARS2Q5ST30 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.11■□□□□ 0.97
VARS2Q5ST30 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.11■□□□□ 0.97
VARS2Q5ST30 AC073195.1-201ENST00000607241 877 ntBASIC21.11■□□□□ 0.97
VARS2Q5ST30 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARS2Q5ST30 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VARS2Q5ST30 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
VARS2Q5ST30 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.11■□□□□ 0.97
VARS2Q5ST30 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VARS2Q5ST30 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.11■□□□□ 0.97
VARS2Q5ST30 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 SMG8-203ENST00000578922 2178 ntBASIC21.1■□□□□ 0.97
VARS2Q5ST30 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.1■□□□□ 0.97
VARS2Q5ST30 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.1■□□□□ 0.97
VARS2Q5ST30 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
VARS2Q5ST30 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
VARS2Q5ST30 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.1■□□□□ 0.97
VARS2Q5ST30 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
VARS2Q5ST30 AC116351.2-201ENST00000606540 1585 ntBASIC21.1■□□□□ 0.97
VARS2Q5ST30 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VARS2Q5ST30 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.1■□□□□ 0.97
VARS2Q5ST30 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VARS2Q5ST30 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARS2Q5ST30 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARS2Q5ST30 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARS2Q5ST30 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARS2Q5ST30 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VARS2Q5ST30 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 AP002982.1-201ENST00000492365 877 ntBASIC21.09■□□□□ 0.97
VARS2Q5ST30 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 AP003071.4-201ENST00000562276 1284 ntBASIC21.09■□□□□ 0.97
VARS2Q5ST30 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 AL353708.3-201ENST00000610272 989 ntBASIC21.09■□□□□ 0.97
VARS2Q5ST30 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARS2Q5ST30 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VARS2Q5ST30 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
VARS2Q5ST30 AP006587.1-201ENST00000534129 1502 ntBASIC21.09■□□□□ 0.97
VARS2Q5ST30 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VARS2Q5ST30 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
VARS2Q5ST30 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VARS2Q5ST30 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VARS2Q5ST30 AL355355.2-201ENST00000442321 338 ntBASIC21.08■□□□□ 0.97
VARS2Q5ST30 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VARS2Q5ST30 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.08■□□□□ 0.97
VARS2Q5ST30 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VARS2Q5ST30 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VARS2Q5ST30 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
VARS2Q5ST30 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VARS2Q5ST30 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.07■□□□□ 0.96
VARS2Q5ST30 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.07■□□□□ 0.96
VARS2Q5ST30 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.07■□□□□ 0.96
VARS2Q5ST30 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.07■□□□□ 0.96
VARS2Q5ST30 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
VARS2Q5ST30 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VARS2Q5ST30 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms