Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
RBM48Q5RL73 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RBM48Q5RL73 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 AC245052.3-201ENST00000450182 901 ntBASIC18.14■□□□□ 0.49
RBM48Q5RL73 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 AC011298.3-201ENST00000615796 283 ntBASIC18.14■□□□□ 0.49
RBM48Q5RL73 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.14■□□□□ 0.49
RBM48Q5RL73 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.14■□□□□ 0.49
RBM48Q5RL73 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RBM48Q5RL73 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RBM48Q5RL73 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.13■□□□□ 0.49
RBM48Q5RL73 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.13■□□□□ 0.49
RBM48Q5RL73 POU5F1P4-201ENST00000413175 1085 ntBASIC18.13■□□□□ 0.49
RBM48Q5RL73 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.13■□□□□ 0.49
RBM48Q5RL73 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RBM48Q5RL73 MIR3621-201ENST00000580529 85 ntBASIC18.13■□□□□ 0.49
RBM48Q5RL73 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.13■□□□□ 0.49
RBM48Q5RL73 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.13■□□□□ 0.49
RBM48Q5RL73 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.13■□□□□ 0.49
RBM48Q5RL73 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBM48Q5RL73 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBM48Q5RL73 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RBM48Q5RL73 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 AC104581.1-202ENST00000635932 2618 ntBASIC18.11■□□□□ 0.49
RBM48Q5RL73 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
RBM48Q5RL73 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.11■□□□□ 0.49
RBM48Q5RL73 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RBM48Q5RL73 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RBM48Q5RL73 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.11■□□□□ 0.49
RBM48Q5RL73 DUX4L19-201ENST00000557448 1267 ntBASIC18.11■□□□□ 0.49
RBM48Q5RL73 AC008175.2-201ENST00000612840 297 ntBASIC18.11■□□□□ 0.49
RBM48Q5RL73 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.11■□□□□ 0.49
RBM48Q5RL73 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RBM48Q5RL73 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.11■□□□□ 0.49
RBM48Q5RL73 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.11■□□□□ 0.49
RBM48Q5RL73 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms