Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF3Q3KNV8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF3Q3KNV8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF3Q3KNV8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 AIRN-201ENST00000601203 4374 ntBASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 GUSBP6-202ENST00000438529 1198 ntBASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 MIR4758-201ENST00000577688 71 ntBASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.56■□□□□ 0.4
PCGF3Q3KNV8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 AC116050.2-201ENST00000612102 1779 ntBASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 TCF3P1-201ENST00000423021 1937 ntBASIC17.55■□□□□ 0.4
PCGF3Q3KNV8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 AC073210.2-201ENST00000430369 194 ntBASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 AC133041.1-202ENST00000642053 222 ntBASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCGF3Q3KNV8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 AC093787.1-201ENST00000450396 207 ntBASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms