Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TMEM179-206ENST00000616017 1645 ntBASIC18.55■□□□□ 0.56
PRICKLE4Q2TBC4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRICKLE4Q2TBC4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRICKLE4Q2TBC4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRICKLE4Q2TBC4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRICKLE4Q2TBC4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE4Q2TBC4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 UNC93B4-201ENST00000505679 747 ntBASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 AC009237.14-201ENST00000609975 1594 ntBASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 AP001271.2-201ENST00000624018 1556 ntBASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE4Q2TBC4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 AC124283.5-201ENST00000624661 1809 ntBASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 AC008687.6-201ENST00000596318 630 ntBASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 AC120498.8-201ENST00000614275 531 ntBASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE4Q2TBC4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PRICKLE4Q2TBC4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRICKLE4Q2TBC4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRICKLE4Q2TBC4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRICKLE4Q2TBC4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.52■□□□□ 0.55
PRICKLE4Q2TBC4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.52■□□□□ 0.55
PRICKLE4Q2TBC4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.52■□□□□ 0.55
PRICKLE4Q2TBC4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 RPS2P52-201ENST00000469610 820 ntBASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 AC116351.2-201ENST00000606540 1585 ntBASIC18.51■□□□□ 0.55
PRICKLE4Q2TBC4 SLC25A24-204ENST00000569674 2357 ntBASIC18.5■□□□□ 0.55
PRICKLE4Q2TBC4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE4Q2TBC4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRICKLE4Q2TBC4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE4Q2TBC4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE4Q2TBC4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE4Q2TBC4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.5■□□□□ 0.55
PRICKLE4Q2TBC4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.5■□□□□ 0.55
PRICKLE4Q2TBC4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms