Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 SMG8-203ENST00000578922 2178 ntBASIC23.96■■□□□ 1.43
PDS5AQ29RF7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
PDS5AQ29RF7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.95■■□□□ 1.43
PDS5AQ29RF7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.95■■□□□ 1.43
PDS5AQ29RF7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.95■■□□□ 1.42
PDS5AQ29RF7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDS5AQ29RF7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
PDS5AQ29RF7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PDS5AQ29RF7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.95■■□□□ 1.42
PDS5AQ29RF7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.95■■□□□ 1.42
PDS5AQ29RF7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.95■■□□□ 1.42
PDS5AQ29RF7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.94■■□□□ 1.42
PDS5AQ29RF7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 KSR1P1-201ENST00000446298 240 ntBASIC23.93■■□□□ 1.42
PDS5AQ29RF7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 AP002982.1-201ENST00000492365 877 ntBASIC23.93■■□□□ 1.42
PDS5AQ29RF7 AL355075.4-201ENST00000554988 638 ntBASIC23.93■■□□□ 1.42
PDS5AQ29RF7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
PDS5AQ29RF7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDS5AQ29RF7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 FAM197Y1-201ENST00000421178 764 ntBASIC23.91■■□□□ 1.42
PDS5AQ29RF7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 NUDT16P1-203ENST00000513809 620 ntBASIC23.91■■□□□ 1.42
PDS5AQ29RF7 AP003071.4-201ENST00000562276 1284 ntBASIC23.91■■□□□ 1.42
PDS5AQ29RF7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDS5AQ29RF7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 AP005212.1-201ENST00000581547 1997 ntBASIC23.9■■□□□ 1.42
PDS5AQ29RF7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDS5AQ29RF7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDS5AQ29RF7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms