Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RAB38P57729 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB38P57729 TCF3P1-201ENST00000423021 1937 ntBASIC18.72■□□□□ 0.59
RAB38P57729 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAB38P57729 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB38P57729 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 FAM201B-201ENST00000458407 597 ntBASIC18.72■□□□□ 0.59
RAB38P57729 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.72■□□□□ 0.59
RAB38P57729 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 AL121906.2-201ENST00000621597 723 ntBASIC18.72■□□□□ 0.59
RAB38P57729 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.72■□□□□ 0.59
RAB38P57729 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB38P57729 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB38P57729 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB38P57729 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB38P57729 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB38P57729 AL691432.2-201ENST00000607222 2038 ntBASIC18.71■□□□□ 0.59
RAB38P57729 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB38P57729 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAB38P57729 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RAB38P57729 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RAB38P57729 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB38P57729 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB38P57729 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB38P57729 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB38P57729 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB38P57729 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB38P57729 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB38P57729 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB38P57729 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB38P57729 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB38P57729 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
RAB38P57729 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB38P57729 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
RAB38P57729 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 AC006058.3-201ENST00000606217 1069 ntBASIC18.7■□□□□ 0.58
RAB38P57729 AC116351.2-201ENST00000606540 1585 ntBASIC18.7■□□□□ 0.58
RAB38P57729 AC069544.1-201ENST00000609399 999 ntBASIC18.7■□□□□ 0.58
RAB38P57729 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 AL121829.2-201ENST00000620908 328 ntBASIC18.7■□□□□ 0.58
RAB38P57729 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB38P57729 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB38P57729 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.69■□□□□ 0.58
RAB38P57729 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RAB38P57729 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB38P57729 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RAB38P57729 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB38P57729 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB38P57729 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB38P57729 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RAB38P57729 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB38P57729 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms