Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.9■□□□□ 0.94
ATXN1P54253 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.9■□□□□ 0.94
ATXN1P54253 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATXN1P54253 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATXN1P54253 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATXN1P54253 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.89■□□□□ 0.94
ATXN1P54253 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.89■□□□□ 0.93
ATXN1P54253 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN1P54253 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ATXN1P54253 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.89■□□□□ 0.93
ATXN1P54253 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.89■□□□□ 0.93
ATXN1P54253 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.89■□□□□ 0.93
ATXN1P54253 AL445228.2-201ENST00000605589 952 ntBASIC20.89■□□□□ 0.93
ATXN1P54253 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
ATXN1P54253 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
ATXN1P54253 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN1P54253 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN1P54253 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.89■□□□□ 0.93
ATXN1P54253 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.89■□□□□ 0.93
ATXN1P54253 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ATXN1P54253 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.89■□□□□ 0.93
ATXN1P54253 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN1P54253 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN1P54253 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ATXN1P54253 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.88■□□□□ 0.93
ATXN1P54253 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATXN1P54253 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATXN1P54253 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATXN1P54253 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.88■□□□□ 0.93
ATXN1P54253 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ATXN1P54253 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
ATXN1P54253 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.88■□□□□ 0.93
ATXN1P54253 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 C1QBPP2-201ENST00000528754 825 ntBASIC20.88■□□□□ 0.93
ATXN1P54253 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATXN1P54253 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
ATXN1P54253 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.88■□□□□ 0.93
ATXN1P54253 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.88■□□□□ 0.93
ATXN1P54253 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ATXN1P54253 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.88■□□□□ 0.93
ATXN1P54253 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ATXN1P54253 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATXN1P54253 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN1P54253 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
ATXN1P54253 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN1P54253 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ATXN1P54253 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATXN1P54253 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN1P54253 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ATXN1P54253 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN1P54253 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN1P54253 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN1P54253 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.87■□□□□ 0.93
ATXN1P54253 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATXN1P54253 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.87■□□□□ 0.93
ATXN1P54253 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.87■□□□□ 0.93
ATXN1P54253 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.87■□□□□ 0.93
ATXN1P54253 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN1P54253 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.87■□□□□ 0.93
ATXN1P54253 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ATXN1P54253 BX119927.1-201ENST00000636596 1552 ntBASIC20.87■□□□□ 0.93
ATXN1P54253 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN1P54253 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN1P54253 KRT8P17-201ENST00000453110 1448 ntBASIC20.87■□□□□ 0.93
ATXN1P54253 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.86■□□□□ 0.93
ATXN1P54253 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN1P54253 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ATXN1P54253 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.86■□□□□ 0.93
ATXN1P54253 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
ATXN1P54253 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.86■□□□□ 0.93
ATXN1P54253 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.86■□□□□ 0.93
ATXN1P54253 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN1P54253 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN1P54253 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.86■□□□□ 0.93
ATXN1P54253 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.86■□□□□ 0.93
ATXN1P54253 AL691432.2-201ENST00000607222 2038 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms