Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDX1P52945 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PDX1P52945 AL121829.2-201ENST00000620908 328 ntBASIC19.33■□□□□ 0.68
PDX1P52945 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDX1P52945 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDX1P52945 PLK5-205ENST00000642079 1969 ntBASIC19.33■□□□□ 0.68
PDX1P52945 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
PDX1P52945 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDX1P52945 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDX1P52945 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDX1P52945 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDX1P52945 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDX1P52945 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.33■□□□□ 0.68
PDX1P52945 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.33■□□□□ 0.68
PDX1P52945 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.33■□□□□ 0.68
PDX1P52945 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PDX1P52945 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.32■□□□□ 0.68
PDX1P52945 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.32■□□□□ 0.68
PDX1P52945 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.32■□□□□ 0.68
PDX1P52945 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.32■□□□□ 0.68
PDX1P52945 AC023632.3-201ENST00000521633 145 ntBASIC19.32■□□□□ 0.68
PDX1P52945 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.32■□□□□ 0.68
PDX1P52945 AL353708.3-201ENST00000610272 989 ntBASIC19.32■□□□□ 0.68
PDX1P52945 AC026471.5-201ENST00000615068 467 ntBASIC19.32■□□□□ 0.68
PDX1P52945 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PDX1P52945 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 AC027702.1-201ENST00000563810 1770 ntBASIC19.32■□□□□ 0.68
PDX1P52945 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDX1P52945 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PDX1P52945 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.31■□□□□ 0.68
PDX1P52945 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.31■□□□□ 0.68
PDX1P52945 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.31■□□□□ 0.68
PDX1P52945 RCN1P1-201ENST00000400413 996 ntBASIC19.31■□□□□ 0.68
PDX1P52945 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PDX1P52945 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.31■□□□□ 0.68
PDX1P52945 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.31■□□□□ 0.68
PDX1P52945 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.31■□□□□ 0.68
PDX1P52945 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.31■□□□□ 0.68
PDX1P52945 AF186192.3-201ENST00000583427 947 ntBASIC19.31■□□□□ 0.68
PDX1P52945 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.31■□□□□ 0.68
PDX1P52945 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.31■□□□□ 0.68
PDX1P52945 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PDX1P52945 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.31■□□□□ 0.68
PDX1P52945 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDX1P52945 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
PDX1P52945 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 HTR7P1-201ENST00000538670 1336 ntBASIC19.3■□□□□ 0.68
PDX1P52945 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.3■□□□□ 0.68
PDX1P52945 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.3■□□□□ 0.68
PDX1P52945 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PDX1P52945 AP003071.4-201ENST00000562276 1284 ntBASIC19.3■□□□□ 0.68
PDX1P52945 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.3■□□□□ 0.68
PDX1P52945 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 KRT8P36-201ENST00000489121 1440 ntBASIC19.3■□□□□ 0.68
PDX1P52945 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PDX1P52945 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDX1P52945 AL157384.1-201ENST00000445995 2473 ntBASIC19.3■□□□□ 0.68
PDX1P52945 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.3■□□□□ 0.68
PDX1P52945 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDX1P52945 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.3■□□□□ 0.68
PDX1P52945 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
PDX1P52945 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PDX1P52945 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms