Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
RPL3P39023 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RPL3P39023 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RPL3P39023 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 AL355472.2-201ENST00000422958 438 ntBASIC18.87■□□□□ 0.61
RPL3P39023 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.87■□□□□ 0.61
RPL3P39023 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.87■□□□□ 0.61
RPL3P39023 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.87■□□□□ 0.61
RPL3P39023 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.87■□□□□ 0.61
RPL3P39023 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RPL3P39023 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.87■□□□□ 0.61
RPL3P39023 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.87■□□□□ 0.61
RPL3P39023 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPL3P39023 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
RPL3P39023 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.86■□□□□ 0.61
RPL3P39023 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
RPL3P39023 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
RPL3P39023 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RPL3P39023 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.86■□□□□ 0.61
RPL3P39023 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RPL3P39023 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.86■□□□□ 0.61
RPL3P39023 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.86■□□□□ 0.61
RPL3P39023 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.86■□□□□ 0.61
RPL3P39023 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.86■□□□□ 0.61
RPL3P39023 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.86■□□□□ 0.61
RPL3P39023 AC022517.1-201ENST00000592429 346 ntBASIC18.86■□□□□ 0.61
RPL3P39023 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.86■□□□□ 0.61
RPL3P39023 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.86■□□□□ 0.61
RPL3P39023 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPL3P39023 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RPL3P39023 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RPL3P39023 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RPL3P39023 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.85■□□□□ 0.61
RPL3P39023 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.85■□□□□ 0.61
RPL3P39023 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.85■□□□□ 0.61
RPL3P39023 AC133552.2-202ENST00000575694 574 ntBASIC18.85■□□□□ 0.61
RPL3P39023 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.85■□□□□ 0.61
RPL3P39023 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.85■□□□□ 0.61
RPL3P39023 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.85■□□□□ 0.61
RPL3P39023 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.85■□□□□ 0.61
RPL3P39023 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.85■□□□□ 0.61
RPL3P39023 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RPL3P39023 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
RPL3P39023 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPL3P39023 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.84■□□□□ 0.61
RPL3P39023 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPL3P39023 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.84■□□□□ 0.61
RPL3P39023 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPL3P39023 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPL3P39023 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPL3P39023 LSM12P1-201ENST00000411836 588 ntBASIC18.84■□□□□ 0.61
RPL3P39023 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPL3P39023 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.84■□□□□ 0.61
RPL3P39023 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.84■□□□□ 0.61
RPL3P39023 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.84■□□□□ 0.61
RPL3P39023 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RPL3P39023 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPL3P39023 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPL3P39023 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPL3P39023 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RPL3P39023 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPL3P39023 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPL3P39023 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPL3P39023 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RPL3P39023 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RPL3P39023 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPL3P39023 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RPL3P39023 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPL3P39023 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.83■□□□□ 0.61
RPL3P39023 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms