Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HMGCLP35914 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGCLP35914 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLP35914 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLP35914 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCLP35914 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLP35914 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLP35914 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.84■□□□□ 0.77
HMGCLP35914 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLP35914 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCLP35914 RPS2P52-201ENST00000469610 820 ntBASIC19.84■□□□□ 0.77
HMGCLP35914 AC026366.1-201ENST00000488803 879 ntBASIC19.84■□□□□ 0.77
HMGCLP35914 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLP35914 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCLP35914 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCLP35914 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLP35914 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCLP35914 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HMGCLP35914 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HMGCLP35914 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.84■□□□□ 0.77
HMGCLP35914 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCLP35914 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCLP35914 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLP35914 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLP35914 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLP35914 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
HMGCLP35914 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLP35914 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.83■□□□□ 0.77
HMGCLP35914 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLP35914 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLP35914 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HMGCLP35914 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLP35914 POM121L13P-201ENST00000422362 380 ntBASIC19.83■□□□□ 0.77
HMGCLP35914 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGCLP35914 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLP35914 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLP35914 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLP35914 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.83■□□□□ 0.76
HMGCLP35914 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.83■□□□□ 0.76
HMGCLP35914 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLP35914 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLP35914 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLP35914 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.83■□□□□ 0.76
HMGCLP35914 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLP35914 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.83■□□□□ 0.76
HMGCLP35914 AC116351.2-201ENST00000606540 1585 ntBASIC19.83■□□□□ 0.76
HMGCLP35914 AP001271.2-201ENST00000624018 1556 ntBASIC19.83■□□□□ 0.76
HMGCLP35914 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCLP35914 AC124283.5-201ENST00000624661 1809 ntBASIC19.82■□□□□ 0.76
HMGCLP35914 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
HMGCLP35914 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HMGCLP35914 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCLP35914 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HMGCLP35914 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.82■□□□□ 0.76
HMGCLP35914 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.82■□□□□ 0.76
HMGCLP35914 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.82■□□□□ 0.76
HMGCLP35914 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HMGCLP35914 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.82■□□□□ 0.76
HMGCLP35914 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HMGCLP35914 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLP35914 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HMGCLP35914 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGCLP35914 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.81■□□□□ 0.76
HMGCLP35914 ESRRAP1-201ENST00000400596 1257 ntBASIC19.81■□□□□ 0.76
HMGCLP35914 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGCLP35914 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.81■□□□□ 0.76
HMGCLP35914 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGCLP35914 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLP35914 AC009237.14-201ENST00000609975 1594 ntBASIC19.81■□□□□ 0.76
HMGCLP35914 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGCLP35914 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HMGCLP35914 PCDHAC2-203ENST00000615316 3011 ntBASIC19.81■□□□□ 0.76
HMGCLP35914 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCLP35914 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLP35914 TMEM179-206ENST00000616017 1645 ntBASIC19.8■□□□□ 0.76
HMGCLP35914 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCLP35914 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLP35914 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLP35914 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCLP35914 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms