Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.84■□□□□ 0.61
CCL4P13236 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.84■□□□□ 0.61
CCL4P13236 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.84■□□□□ 0.61
CCL4P13236 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.84■□□□□ 0.61
CCL4P13236 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCL4P13236 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.84■□□□□ 0.61
CCL4P13236 FITM1-202ENST00000559294 800 ntBASIC18.84■□□□□ 0.61
CCL4P13236 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.84■□□□□ 0.61
CCL4P13236 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.84■□□□□ 0.61
CCL4P13236 AC092865.7-201ENST00000641832 219 ntBASIC18.84■□□□□ 0.61
CCL4P13236 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CCL4P13236 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.84■□□□□ 0.61
CCL4P13236 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.84■□□□□ 0.61
CCL4P13236 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL4P13236 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCL4P13236 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.83■□□□□ 0.61
CCL4P13236 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.83■□□□□ 0.61
CCL4P13236 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCL4P13236 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCL4P13236 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CCL4P13236 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCL4P13236 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL4P13236 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCL4P13236 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL4P13236 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCL4P13236 KRT18P35-201ENST00000510488 1269 ntBASIC18.83■□□□□ 0.6
CCL4P13236 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.83■□□□□ 0.6
CCL4P13236 NAPSB-206ENST00000562112 1266 ntBASIC18.83■□□□□ 0.6
CCL4P13236 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.83■□□□□ 0.6
CCL4P13236 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCL4P13236 AC010947.1-201ENST00000623454 693 ntBASIC18.83■□□□□ 0.6
CCL4P13236 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.83■□□□□ 0.6
CCL4P13236 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL4P13236 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL4P13236 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCL4P13236 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCL4P13236 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL4P13236 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL4P13236 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.82■□□□□ 0.6
CCL4P13236 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL4P13236 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCL4P13236 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL4P13236 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.82■□□□□ 0.6
CCL4P13236 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
CCL4P13236 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.82■□□□□ 0.6
CCL4P13236 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL4P13236 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.82■□□□□ 0.6
CCL4P13236 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCL4P13236 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCL4P13236 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL4P13236 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL4P13236 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL4P13236 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL4P13236 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 AC007225.1-201ENST00000566331 1836 ntBASIC18.81■□□□□ 0.6
CCL4P13236 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CCL4P13236 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CCL4P13236 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CCL4P13236 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 KRT18P57-201ENST00000443599 1254 ntBASIC18.81■□□□□ 0.6
CCL4P13236 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.81■□□□□ 0.6
CCL4P13236 AL049597.2-201ENST00000565575 961 ntBASIC18.81■□□□□ 0.6
CCL4P13236 C1QL1P1-201ENST00000568105 661 ntBASIC18.81■□□□□ 0.6
CCL4P13236 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.81■□□□□ 0.6
CCL4P13236 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL4P13236 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.81■□□□□ 0.6
CCL4P13236 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCL4P13236 AC116351.2-201ENST00000606540 1585 ntBASIC18.81■□□□□ 0.6
CCL4P13236 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL4P13236 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL4P13236 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL4P13236 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL4P13236 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL4P13236 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCL4P13236 AC026310.3-201ENST00000625186 2373 ntBASIC18.8■□□□□ 0.6
CCL4P13236 ARMC10P1-201ENST00000313754 855 ntBASIC18.8■□□□□ 0.6
CCL4P13236 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.8■□□□□ 0.6
CCL4P13236 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.8■□□□□ 0.6
CCL4P13236 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.8■□□□□ 0.6
CCL4P13236 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms