Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.86■■□□□ 1.09
VTNP04004 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VTNP04004 CD177P1-201ENST00000606252 935 ntBASIC21.86■■□□□ 1.09
VTNP04004 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VTNP04004 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VTNP04004 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
VTNP04004 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VTNP04004 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VTNP04004 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.86■■□□□ 1.09
VTNP04004 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
VTNP04004 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VTNP04004 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.86■■□□□ 1.09
VTNP04004 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VTNP04004 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VTNP04004 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VTNP04004 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
VTNP04004 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.85■■□□□ 1.09
VTNP04004 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VTNP04004 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VTNP04004 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.85■■□□□ 1.09
VTNP04004 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
VTNP04004 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
VTNP04004 AC211429.1-201ENST00000415277 523 ntBASIC21.85■■□□□ 1.09
VTNP04004 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
VTNP04004 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
VTNP04004 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.85■■□□□ 1.09
VTNP04004 AC026471.5-201ENST00000615068 467 ntBASIC21.85■■□□□ 1.09
VTNP04004 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VTNP04004 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VTNP04004 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VTNP04004 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
VTNP04004 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
VTNP04004 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.84■■□□□ 1.09
VTNP04004 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.84■■□□□ 1.09
VTNP04004 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
VTNP04004 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
VTNP04004 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
VTNP04004 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 AL353807.1-201ENST00000427475 662 ntBASIC21.84■■□□□ 1.09
VTNP04004 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.84■■□□□ 1.09
VTNP04004 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.84■■□□□ 1.09
VTNP04004 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.84■■□□□ 1.09
VTNP04004 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.84■■□□□ 1.09
VTNP04004 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.84■■□□□ 1.09
VTNP04004 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VTNP04004 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VTNP04004 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.83■■□□□ 1.09
VTNP04004 AC116351.2-201ENST00000606540 1585 ntBASIC21.83■■□□□ 1.09
VTNP04004 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
VTNP04004 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VTNP04004 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VTNP04004 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.83■■□□□ 1.09
VTNP04004 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.83■■□□□ 1.09
VTNP04004 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.83■■□□□ 1.09
VTNP04004 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VTNP04004 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
VTNP04004 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
VTNP04004 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.83■■□□□ 1.08
VTNP04004 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTNP04004 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
VTNP04004 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTNP04004 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.82■■□□□ 1.08
VTNP04004 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.82■■□□□ 1.08
VTNP04004 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.82■■□□□ 1.08
VTNP04004 AP003071.4-201ENST00000562276 1284 ntBASIC21.82■■□□□ 1.08
VTNP04004 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.82■■□□□ 1.08
VTNP04004 AC073195.1-201ENST00000607241 877 ntBASIC21.82■■□□□ 1.08
VTNP04004 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.82■■□□□ 1.08
VTNP04004 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VTNP04004 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTNP04004 AC018553.1-201ENST00000616682 1458 ntBASIC21.82■■□□□ 1.08
VTNP04004 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTNP04004 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VTNP04004 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTNP04004 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.81■■□□□ 1.08
VTNP04004 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VTNP04004 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.81■■□□□ 1.08
VTNP04004 AP006587.1-201ENST00000534129 1502 ntBASIC21.81■■□□□ 1.08
VTNP04004 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTNP04004 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.81■■□□□ 1.08
VTNP04004 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
VTNP04004 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
VTNP04004 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTNP04004 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTNP04004 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTNP04004 AL355355.2-201ENST00000442321 338 ntBASIC21.81■■□□□ 1.08
VTNP04004 AP002982.1-201ENST00000492365 877 ntBASIC21.81■■□□□ 1.08
VTNP04004 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.81■■□□□ 1.08
VTNP04004 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.81■■□□□ 1.08
VTNP04004 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.81■■□□□ 1.08
VTNP04004 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTNP04004 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms