Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC092118.2-201ENST00000613495 667 ntBASIC19.83■□□□□ 0.77
NDUFS3O75489 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFS3O75489 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.83■□□□□ 0.76
NDUFS3O75489 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.83■□□□□ 0.76
NDUFS3O75489 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFS3O75489 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.83■□□□□ 0.76
NDUFS3O75489 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFS3O75489 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NDUFS3O75489 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NDUFS3O75489 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.82■□□□□ 0.76
NDUFS3O75489 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFS3O75489 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFS3O75489 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NDUFS3O75489 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFS3O75489 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.82■□□□□ 0.76
NDUFS3O75489 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFS3O75489 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFS3O75489 DUSP5P2-201ENST00000426873 1033 ntBASIC19.82■□□□□ 0.76
NDUFS3O75489 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.82■□□□□ 0.76
NDUFS3O75489 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.82■□□□□ 0.76
NDUFS3O75489 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.82■□□□□ 0.76
NDUFS3O75489 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.82■□□□□ 0.76
NDUFS3O75489 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.82■□□□□ 0.76
NDUFS3O75489 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.82■□□□□ 0.76
NDUFS3O75489 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.82■□□□□ 0.76
NDUFS3O75489 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.82■□□□□ 0.76
NDUFS3O75489 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFS3O75489 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.82■□□□□ 0.76
NDUFS3O75489 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFS3O75489 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFS3O75489 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFS3O75489 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
NDUFS3O75489 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.81■□□□□ 0.76
NDUFS3O75489 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NDUFS3O75489 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFS3O75489 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NDUFS3O75489 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFS3O75489 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.81■□□□□ 0.76
NDUFS3O75489 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NDUFS3O75489 GUSBP6-202ENST00000438529 1198 ntBASIC19.81■□□□□ 0.76
NDUFS3O75489 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NDUFS3O75489 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFS3O75489 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.81■□□□□ 0.76
NDUFS3O75489 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.81■□□□□ 0.76
NDUFS3O75489 MIR4758-201ENST00000577688 71 ntBASIC19.81■□□□□ 0.76
NDUFS3O75489 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFS3O75489 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFS3O75489 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFS3O75489 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
NDUFS3O75489 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NDUFS3O75489 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS3O75489 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NDUFS3O75489 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.8■□□□□ 0.76
NDUFS3O75489 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS3O75489 TMEM179-206ENST00000616017 1645 ntBASIC19.8■□□□□ 0.76
NDUFS3O75489 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS3O75489 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS3O75489 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS3O75489 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS3O75489 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS3O75489 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS3O75489 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.8■□□□□ 0.76
NDUFS3O75489 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.8■□□□□ 0.76
NDUFS3O75489 AC090192.1-201ENST00000517740 490 ntBASIC19.8■□□□□ 0.76
NDUFS3O75489 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.8■□□□□ 0.76
NDUFS3O75489 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS3O75489 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.8■□□□□ 0.76
NDUFS3O75489 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS3O75489 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NDUFS3O75489 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS3O75489 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.79■□□□□ 0.76
NDUFS3O75489 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.79■□□□□ 0.76
NDUFS3O75489 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NDUFS3O75489 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS3O75489 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.79■□□□□ 0.76
NDUFS3O75489 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS3O75489 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS3O75489 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NDUFS3O75489 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.79■□□□□ 0.76
NDUFS3O75489 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS3O75489 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS3O75489 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.79■□□□□ 0.76
NDUFS3O75489 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.79■□□□□ 0.76
NDUFS3O75489 AL109923.1-201ENST00000618799 583 ntBASIC19.79■□□□□ 0.76
NDUFS3O75489 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms