Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SSX6-201ENST00000376932 562 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 SNORD65-201ENST00000391079 73 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 PTMAP8-201ENST00000397729 342 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC113608.1-201ENST00000398740 305 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 Z86062.1-201ENST00000406773 777 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC004986.1-201ENST00000414855 607 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 MICG-208ENST00000416822 132 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC073310.1-201ENST00000423226 1033 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 FTH1P5-201ENST00000425761 545 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AL645931.1-201ENST00000439737 410 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 LIN28AP2-201ENST00000445283 458 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 YRDCP3-201ENST00000456507 480 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 RN7SL870P-201ENST00000460111 296 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 RPSAP24-201ENST00000461543 873 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 RN7SL233P-201ENST00000469988 277 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC010460.2-201ENST00000509054 677 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC6.51□□□□□ -1.37
NKX6-1P78426 SNX18P27-201ENST00000523611 779 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC093014.1-201ENST00000548926 724 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 NOP56P3-201ENST00000549457 385 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.51□□□□□ -1.37
NKX6-1P78426 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AL136139.1-201ENST00000605568 222 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC018690.1-201ENST00000608144 626 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AL137246.2-201ENST00000613439 662 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC004801.6-201ENST00000616571 978 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 RN7SL680P-201ENST00000620379 299 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC095038.2-201ENST00000621464 1070 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC068880.4-201ENST00000623082 495 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 AC090506.2-201ENST00000624521 419 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 AC135068.11-201ENST00000636378 921 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 TMEM30CP-203ENST00000637814 1035 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 KYNUP1-201ENST00000466683 1406 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC073342.2-201ENST00000595842 1800 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 DDX50P1-201ENST00000438163 2400 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
NKX6-1P78426 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.5□□□□□ -1.37
NKX6-1P78426 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 SOCS5P5-201ENST00000402732 1586 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AL161891.1-201ENST00000621575 4636 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC120036.2-201ENST00000509729 1474 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 RAD1P1-201ENST00000231383 813 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AL078621.1-201ENST00000272567 768 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NKX6-1P78426 RNA5SP396-201ENST00000364834 120 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC099535.1-201ENST00000408928 371 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AL359633.1-201ENST00000421403 310 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 MORF4L1P5-201ENST00000433352 961 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AL356133.1-201ENST00000444762 372 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms