Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.72□□□□□ -1.49
AP3S2P59780 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
AP3S2P59780 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
AP3S2P59780 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
AP3S2P59780 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
AP3S2P59780 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.71□□□□□ -1.49
AP3S2P59780 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.71□□□□□ -1.5
AP3S2P59780 AC012078.1-201ENST00000405035 1646 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.71□□□□□ -1.5
AP3S2P59780 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
AP3S2P59780 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
AP3S2P59780 SHQ1P1-201ENST00000437111 1544 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
AP3S2P59780 RN7SKP186-201ENST00000365371 303 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
AP3S2P59780 AC133644.1-201ENST00000398171 937 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 RPL23AP17-201ENST00000401064 499 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.71□□□□□ -1.5
AP3S2P59780 AL035658.1-201ENST00000415054 357 ntTSL 3 BASIC5.71□□□□□ -1.5
AP3S2P59780 RBMY2YP-201ENST00000423333 912 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 OR5W1P-201ENST00000423705 938 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 AC239367.3-201ENST00000428996 814 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.71□□□□□ -1.5
AP3S2P59780 AC245047.6-201ENST00000445444 617 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 SAP18P3-201ENST00000449663 396 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 AC093799.1-201ENST00000452411 499 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
AP3S2P59780 PABPC1P10-201ENST00000464731 381 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC5.71□□□□□ -1.5
AP3S2P59780 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC5.71□□□□□ -1.5
AP3S2P59780 RN7SL187P-201ENST00000495587 303 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 AC021106.2-201ENST00000505310 710 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
AP3S2P59780 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC5.71□□□□□ -1.5
AP3S2P59780 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC5.71□□□□□ -1.5
AP3S2P59780 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.71□□□□□ -1.5
AP3S2P59780 AL031846.1-201ENST00000560933 314 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC5.71□□□□□ -1.5
AP3S2P59780 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.71□□□□□ -1.5
AP3S2P59780 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.71□□□□□ -1.5
AP3S2P59780 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.71□□□□□ -1.5
AP3S2P59780 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
AP3S2P59780 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.71□□□□□ -1.5
AP3S2P59780 AL731556.2-201ENST00000615610 770 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 AL121936.2-201ENST00000641935 662 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
AP3S2P59780 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.71□□□□□ -1.5
AP3S2P59780 AC105235.1-201ENST00000623208 1816 ntBASIC5.71□□□□□ -1.5
AP3S2P59780 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.71□□□□□ -1.5
AP3S2P59780 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
AP3S2P59780 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
AP3S2P59780 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
AP3S2P59780 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
AP3S2P59780 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.7□□□□□ -1.5
AP3S2P59780 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
AP3S2P59780 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
AP3S2P59780 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.7□□□□□ -1.5
AP3S2P59780 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
AP3S2P59780 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
AP3S2P59780 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
AP3S2P59780 SNORD15A-201ENST00000384214 148 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 AL359715.1-201ENST00000404330 555 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 RN7SKP194-201ENST00000411328 351 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 PPIAP30-201ENST00000415473 519 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.7□□□□□ -1.5
AP3S2P59780 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.7□□□□□ -1.5
AP3S2P59780 AC018892.2-201ENST00000457656 693 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 CCNJP2-201ENST00000457810 1163 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 RPS18P13-201ENST00000461260 454 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC5.7□□□□□ -1.5
AP3S2P59780 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC5.7□□□□□ -1.5
AP3S2P59780 IGLV10-67-201ENST00000519446 325 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
AP3S2P59780 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC5.7□□□□□ -1.5
AP3S2P59780 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AP3S2P59780 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.7□□□□□ -1.5
AP3S2P59780 AC144548.1-201ENST00000549577 324 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.7□□□□□ -1.5
AP3S2P59780 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.7□□□□□ -1.5
AP3S2P59780 AC026458.1-201ENST00000564330 438 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 AC108451.2-201ENST00000603875 538 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC5.7□□□□□ -1.5
AP3S2P59780 BX005195.1-201ENST00000618097 1198 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.7□□□□□ -1.5
AP3S2P59780 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.7□□□□□ -1.5
AP3S2P59780 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.7□□□□□ -1.5
AP3S2P59780 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
AP3S2P59780 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
AP3S2P59780 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
AP3S2P59780 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AP3S2P59780 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.7□□□□□ -1.5
AP3S2P59780 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.7□□□□□ -1.5
AP3S2P59780 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
AP3S2P59780 AL353763.1-201ENST00000624467 1628 ntBASIC5.7□□□□□ -1.5
AP3S2P59780 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms