Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OR4A13P-201ENST00000529316 942 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC8.09□□□□□ -1.11
RHBDL3P58872 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.09□□□□□ -1.11
RHBDL3P58872 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.09□□□□□ -1.11
RHBDL3P58872 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC8.09□□□□□ -1.11
RHBDL3P58872 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC8.09□□□□□ -1.11
RHBDL3P58872 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.09□□□□□ -1.11
RHBDL3P58872 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 AL035425.4-201ENST00000624509 1063 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RHBDL3P58872 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.09□□□□□ -1.11
RHBDL3P58872 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 AC104837.1-201ENST00000444644 1587 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 CASC19-255ENST00000641733 1385 ntBASIC8.09□□□□□ -1.12
RHBDL3P58872 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
RHBDL3P58872 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.09□□□□□ -1.12
RHBDL3P58872 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 PSMC1P6-201ENST00000477233 1319 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.08□□□□□ -1.12
RHBDL3P58872 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.08□□□□□ -1.12
RHBDL3P58872 PPIAP24-201ENST00000328558 471 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 AL359694.1-201ENST00000403247 604 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.08□□□□□ -1.12
RHBDL3P58872 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.08□□□□□ -1.12
RHBDL3P58872 CYP4F32P-201ENST00000426492 504 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 AC092106.2-201ENST00000436597 487 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC8.08□□□□□ -1.12
RHBDL3P58872 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.08□□□□□ -1.12
RHBDL3P58872 AC236972.4-201ENST00000458091 963 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 AC135999.1-201ENST00000478962 479 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.08□□□□□ -1.12
RHBDL3P58872 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC8.08□□□□□ -1.12
RHBDL3P58872 AC021220.1-201ENST00000507445 630 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 AC093664.1-201ENST00000511779 289 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 OR52H2P-201ENST00000514607 902 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC8.08□□□□□ -1.12
RHBDL3P58872 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC8.08□□□□□ -1.12
RHBDL3P58872 AL445383.1-201ENST00000554689 874 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 AC026956.1-201ENST00000558741 396 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.08□□□□□ -1.12
RHBDL3P58872 AC245052.7-201ENST00000601161 359 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 AC107905.1-201ENST00000616204 426 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
RHBDL3P58872 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC8.08□□□□□ -1.12
RHBDL3P58872 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
RHBDL3P58872 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
RHBDL3P58872 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RHBDL3P58872 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC8.08□□□□□ -1.12
RHBDL3P58872 AC096992.2-201ENST00000609553 1684 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 BRAFP1-201ENST00000445336 2703 ntBASIC8.08□□□□□ -1.12
RHBDL3P58872 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
RHBDL3P58872 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.07□□□□□ -1.12
RHBDL3P58872 AL117378.2-201ENST00000622916 1337 ntBASIC8.07□□□□□ -1.12
RHBDL3P58872 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
RHBDL3P58872 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.07□□□□□ -1.12
RHBDL3P58872 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RHBDL3P58872 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.07□□□□□ -1.12
RHBDL3P58872 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.07□□□□□ -1.12
RHBDL3P58872 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.07□□□□□ -1.12
RHBDL3P58872 CYCSP17-201ENST00000407870 315 ntBASIC8.07□□□□□ -1.12
RHBDL3P58872 MRPS21P5-201ENST00000417885 231 ntBASIC8.07□□□□□ -1.12
RHBDL3P58872 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC8.07□□□□□ -1.12
RHBDL3P58872 PAICSP2-201ENST00000429118 1150 ntBASIC8.07□□□□□ -1.12
RHBDL3P58872 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 DEFA11P-201ENST00000446470 261 ntBASIC8.07□□□□□ -1.12
RHBDL3P58872 SSX8-201ENST00000506270 579 ntBASIC8.07□□□□□ -1.12
RHBDL3P58872 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC8.07□□□□□ -1.12
RHBDL3P58872 HNRNPRP2-201ENST00000528421 743 ntBASIC8.07□□□□□ -1.12
RHBDL3P58872 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.07□□□□□ -1.12
RHBDL3P58872 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.07□□□□□ -1.12
RHBDL3P58872 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC8.07□□□□□ -1.12
RHBDL3P58872 FXNP1-201ENST00000555153 337 ntBASIC8.07□□□□□ -1.12
RHBDL3P58872 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC8.07□□□□□ -1.12
RHBDL3P58872 AC025283.1-201ENST00000572039 734 ntBASIC8.07□□□□□ -1.12
RHBDL3P58872 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.07□□□□□ -1.12
RHBDL3P58872 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.07□□□□□ -1.12
RHBDL3P58872 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
RHBDL3P58872 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
RHBDL3P58872 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.07□□□□□ -1.12
RHBDL3P58872 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms