Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC004232.1-201ENST00000571388 208 ntBASIC7.14□□□□□ -1.27
LHX1P48742 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
LHX1P48742 RPL29P33-201ENST00000587474 316 ntBASIC7.14□□□□□ -1.27
LHX1P48742 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.14□□□□□ -1.27
LHX1P48742 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.14□□□□□ -1.27
LHX1P48742 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.14□□□□□ -1.27
LHX1P48742 AC079949.2-201ENST00000617117 2933 ntBASIC7.14□□□□□ -1.27
LHX1P48742 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.14□□□□□ -1.27
LHX1P48742 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 AC068213.1-201ENST00000625124 226 ntBASIC7.14□□□□□ -1.27
LHX1P48742 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.14□□□□□ -1.27
LHX1P48742 AL021877.2-201ENST00000624442 10684 ntBASIC7.14□□□□□ -1.27
LHX1P48742 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.14□□□□□ -1.27
LHX1P48742 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
LHX1P48742 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.13□□□□□ -1.27
LHX1P48742 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 AL355974.1-201ENST00000618896 1708 ntBASIC7.13□□□□□ -1.27
LHX1P48742 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.13□□□□□ -1.27
LHX1P48742 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 PSMC1P4-201ENST00000515236 1327 ntBASIC7.13□□□□□ -1.27
LHX1P48742 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 RPL24P4-201ENST00000326586 421 ntBASIC7.13□□□□□ -1.27
LHX1P48742 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.13□□□□□ -1.27
LHX1P48742 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.13□□□□□ -1.27
LHX1P48742 RPL12P49-201ENST00000441100 121 ntBASIC7.13□□□□□ -1.27
LHX1P48742 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.13□□□□□ -1.27
LHX1P48742 OR9G2P-201ENST00000533326 880 ntBASIC7.13□□□□□ -1.27
LHX1P48742 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.13□□□□□ -1.27
LHX1P48742 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.13□□□□□ -1.27
LHX1P48742 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.13□□□□□ -1.27
LHX1P48742 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.13□□□□□ -1.27
LHX1P48742 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.13□□□□□ -1.27
LHX1P48742 AC106785.4-201ENST00000569492 412 ntBASIC7.13□□□□□ -1.27
LHX1P48742 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 AP000577.1-201ENST00000624366 878 ntBASIC7.13□□□□□ -1.27
LHX1P48742 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 AC007603.3-201ENST00000636915 979 ntBASIC7.13□□□□□ -1.27
LHX1P48742 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.13□□□□□ -1.27
LHX1P48742 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX1P48742 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.13□□□□□ -1.27
LHX1P48742 MAPK10-357ENST00000641831 2858 ntBASIC7.13□□□□□ -1.27
LHX1P48742 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.13□□□□□ -1.27
LHX1P48742 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LHX1P48742 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 AC217777.1-201ENST00000570034 1471 ntBASIC7.12□□□□□ -1.27
LHX1P48742 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 BX322650.1-201ENST00000332359 2143 ntBASIC7.12□□□□□ -1.27
LHX1P48742 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.12□□□□□ -1.27
LHX1P48742 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
LHX1P48742 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
LHX1P48742 RNU6-233P-201ENST00000410845 141 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 UBTFL2-201ENST00000411859 1191 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.12□□□□□ -1.27
LHX1P48742 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.12□□□□□ -1.27
LHX1P48742 AC091390.2-201ENST00000432573 374 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AC013403.1-201ENST00000436954 263 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.12□□□□□ -1.27
LHX1P48742 RPS18P1-201ENST00000447840 458 ntBASIC7.12□□□□□ -1.27
LHX1P48742 CEACAMP5-201ENST00000448037 961 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms