Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC112694.2-201ENST00000623697 768 ntBASIC6.5□□□□□ -1.37
CD40P25942 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 TDGF1P3-202ENST00000602699 2710 ntBASIC6.5□□□□□ -1.37
CD40P25942 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CD40P25942 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CD40P25942 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CD40P25942 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 NBPF8-201ENST00000583271 5330 ntBASIC6.49□□□□□ -1.37
CD40P25942 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD40P25942 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD40P25942 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 RBMX2P2-201ENST00000257020 946 ntBASIC6.49□□□□□ -1.37
CD40P25942 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD40P25942 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD40P25942 RNA5SP396-201ENST00000364834 120 ntBASIC6.49□□□□□ -1.37
CD40P25942 RNU1-122P-201ENST00000365538 156 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD40P25942 MIR498-201ENST00000385134 124 ntBASIC6.49□□□□□ -1.37
CD40P25942 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.49□□□□□ -1.37
CD40P25942 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 AC020983.1-201ENST00000417063 543 ntBASIC6.49□□□□□ -1.37
CD40P25942 RPL22P18-201ENST00000417197 377 ntBASIC6.49□□□□□ -1.37
CD40P25942 USP9YP21-201ENST00000420603 432 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC010099.3-201ENST00000423896 409 ntBASIC6.49□□□□□ -1.37
CD40P25942 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 OR5P4P-201ENST00000424698 917 ntBASIC6.49□□□□□ -1.37
CD40P25942 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 AL645936.2-201ENST00000430565 928 ntBASIC6.49□□□□□ -1.37
CD40P25942 NDUFA5P10-201ENST00000432147 357 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC105052.2-201ENST00000434317 794 ntBASIC6.49□□□□□ -1.37
CD40P25942 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 AC069540.1-201ENST00000446320 988 ntBASIC6.49□□□□□ -1.37
CD40P25942 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 AL390026.1-201ENST00000456647 457 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC008620.1-201ENST00000468453 592 ntBASIC6.49□□□□□ -1.37
CD40P25942 RPS4XP6-201ENST00000477670 797 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC008799.2-201ENST00000484429 647 ntBASIC6.49□□□□□ -1.37
CD40P25942 RPS27AP16-201ENST00000492222 470 ntBASIC6.49□□□□□ -1.37
CD40P25942 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 AC106760.2-201ENST00000504159 619 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 AC105313.1-201ENST00000509121 353 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC6.49□□□□□ -1.37
CD40P25942 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 RBMS2P1-201ENST00000525031 1226 ntBASIC6.49□□□□□ -1.37
CD40P25942 OR7E128P-201ENST00000532736 1024 ntBASIC6.49□□□□□ -1.37
CD40P25942 AP001804.2-201ENST00000533932 910 ntBASIC6.49□□□□□ -1.37
CD40P25942 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.49□□□□□ -1.37
CD40P25942 DPPA3P2-202ENST00000557188 1219 ntBASIC6.49□□□□□ -1.37
CD40P25942 AL132640.2-202ENST00000559732 614 ntBASIC6.49□□□□□ -1.37
CD40P25942 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 UBE2CP4-201ENST00000561405 535 ntBASIC6.49□□□□□ -1.37
CD40P25942 MTND3P13-201ENST00000574391 343 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 AP006587.6-201ENST00000582128 1091 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC012254.4-201ENST00000588843 273 ntBASIC6.49□□□□□ -1.37
CD40P25942 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.49□□□□□ -1.37
CD40P25942 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 AP002967.1-201ENST00000624203 539 ntBASIC6.49□□□□□ -1.37
CD40P25942 OR8G3P-202ENST00000641572 1255 ntBASIC6.49□□□□□ -1.37
CD40P25942 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms