Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL1P09341 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 AL731532.1-201ENST00000623972 4236 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 RNA5SP442-201ENST00000365050 107 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 CST13P-201ENST00000376992 428 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 RN7SKP161-201ENST00000411110 305 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL1P09341 HMGA1P8-201ENST00000414130 321 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 AC017104.2-201ENST00000417000 321 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 RPL23AP34-201ENST00000423483 410 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 RPSAP62-201ENST00000432596 833 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 HMGN2P24-201ENST00000433516 273 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL1P09341 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL1P09341 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL1P09341 Z83838.1-202ENST00000456225 839 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 AC013429.1-201ENST00000456604 422 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 RN7SL587P-201ENST00000459853 281 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 AC022730.2-201ENST00000465359 452 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 AL355032.1-201ENST00000472981 438 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 RN7SL306P-201ENST00000492941 296 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 TECRP2-201ENST00000503270 928 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL1P09341 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 AC087257.2-201ENST00000538759 928 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL1P09341 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL1P09341 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC5.13□□□□□ -1.59
CXCL1P09341 AL355076.3-201ENST00000555838 587 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.13□□□□□ -1.59
CXCL1P09341 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL1P09341 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 RPS28P1-201ENST00000604589 187 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 AC027271.1-201ENST00000610270 610 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 AC011471.4-201ENST00000638271 216 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
CXCL1P09341 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 AC106872.6-201ENST00000514228 1346 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL1P09341 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL1P09341 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CXCL1P09341 RN7SKP186-201ENST00000365371 303 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CXCL1P09341 SNORD15A-201ENST00000384214 148 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC5.12□□□□□ -1.59
CXCL1P09341 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CXCL1P09341 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC018892.2-201ENST00000457656 693 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 RPL34P34-201ENST00000465389 354 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC5.12□□□□□ -1.59
CXCL1P09341 RN7SL702P-201ENST00000488394 292 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 RN7SL516P-201ENST00000496127 297 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.12□□□□□ -1.59
CXCL1P09341 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC097486.1-201ENST00000515331 210 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.12□□□□□ -1.59
CXCL1P09341 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms