Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 USP3-201ENST00000268049 5311 ntTSL 5 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
HFM1A2PYH4 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
HFM1A2PYH4 OR2M1P-201ENST00000318104 951 ntBASIC9.79□□□□□ -0.84
HFM1A2PYH4 RN7SKP269-201ENST00000365545 319 ntBASIC9.79□□□□□ -0.84
HFM1A2PYH4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
HFM1A2PYH4 AL645939.3-201ENST00000435408 225 ntBASIC9.79□□□□□ -0.84
HFM1A2PYH4 RN7SL39P-201ENST00000462264 297 ntBASIC9.79□□□□□ -0.84
HFM1A2PYH4 RPL19P11-201ENST00000495944 589 ntBASIC9.79□□□□□ -0.84
HFM1A2PYH4 HMGN1P16-201ENST00000508308 283 ntBASIC9.79□□□□□ -0.84
HFM1A2PYH4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 AL049840.5-201ENST00000602827 552 ntBASIC9.79□□□□□ -0.84
HFM1A2PYH4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
HFM1A2PYH4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 TATDN2P3-201ENST00000452855 3665 ntBASIC9.79□□□□□ -0.84
HFM1A2PYH4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC9.79□□□□□ -0.84
HFM1A2PYH4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
HFM1A2PYH4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
HFM1A2PYH4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC005839.1-201ENST00000624148 3213 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 VTRNA3-1P-201ENST00000362552 102 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 PRELID1P1-201ENST00000403549 660 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 GPN3P1-201ENST00000423883 535 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 Z68868.1-201ENST00000429048 544 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 RPSAP40-201ENST00000442343 891 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 EEF1B2P3-201ENST00000447718 678 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 RBMY3AP-201ENST00000449381 1145 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 CCNJP2-201ENST00000457810 1163 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC135983.3-201ENST00000528049 1226 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 SYPL1P2-201ENST00000582878 727 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC063977.7-201ENST00000594454 337 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC011891.2-201ENST00000604949 397 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC9.78□□□□□ -0.84
HFM1A2PYH4 AL589743.6-201ENST00000611025 117 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC012676.3-201ENST00000614983 479 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 SNX18P10-201ENST00000625014 519 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HFM1A2PYH4 API5P1-201ENST00000424316 1510 ntBASIC9.78□□□□□ -0.84
HFM1A2PYH4 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC9.77□□□□□ -0.84
HFM1A2PYH4 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
HFM1A2PYH4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
HFM1A2PYH4 AC138915.4-201ENST00000565549 4147 ntBASIC9.77□□□□□ -0.84
HFM1A2PYH4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HFM1A2PYH4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HFM1A2PYH4 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
HFM1A2PYH4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 TVP23CP1-201ENST00000450317 639 ntBASIC9.77□□□□□ -0.85
HFM1A2PYH4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HFM1A2PYH4 OR1E3-201ENST00000575608 948 ntBASIC9.77□□□□□ -0.85
HFM1A2PYH4 MIR3154-201ENST00000577829 84 ntBASIC9.77□□□□□ -0.85
HFM1A2PYH4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 AC130448.2-201ENST00000624082 374 ntBASIC9.77□□□□□ -0.85
HFM1A2PYH4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HFM1A2PYH4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HFM1A2PYH4 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HFM1A2PYH4 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 AC131649.2-201ENST00000624925 4439 ntBASIC9.77□□□□□ -0.85
HFM1A2PYH4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.77□□□□□ -0.85
HFM1A2PYH4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms