Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 AL135786.2-201ENST00000608422 615 ntBASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 MIR6731-201ENST00000614863 72 ntBASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 AC011472.4-201ENST00000615848 491 ntBASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 AC124319.3-201ENST00000616832 526 ntBASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 AC013470.4-201ENST00000619978 986 ntBASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 AC138907.10-201ENST00000623708 983 ntBASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 IL15-207ENST00000514653 1388 ntTSL 5 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 PHF2P2-202ENST00000444553 2865 ntBASIC8.55□□□□□ -1.04
TRAIPQ9BWF2 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AL121835.2-201ENST00000624253 3502 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC105046.1-201ENST00000566457 4997 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC074198.1-201ENST00000506546 1397 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 RNA5SP389-201ENST00000362610 115 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 RNA5SP226-201ENST00000362653 115 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 RGS5-202ENST00000367903 934 ntTSL 3 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AL034374.1-201ENST00000406329 351 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC096537.2-201ENST00000413707 714 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 BTF3P8-201ENST00000414577 526 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AL358942.1-201ENST00000418595 1178 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 RPS3AP37-201ENST00000419176 745 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC231532.1-201ENST00000438584 312 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 EMC3-AS1-205ENST00000438698 534 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 RPSAP40-201ENST00000442343 891 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC114755.1-201ENST00000453101 868 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 TCEAL4P1-201ENST00000453620 588 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 PSMC1P13-201ENST00000458195 985 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 RN7SL228P-201ENST00000470060 303 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 RN7SL282P-201ENST00000479676 297 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC079944.1-201ENST00000485426 495 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 OSTC-204ENST00000512478 663 ntTSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AP003174.3-201ENST00000537926 516 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 DCN-207ENST00000546370 586 ntTSL 3 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC133569.1-201ENST00000564327 373 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 CYP2C60P-201ENST00000566088 139 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 MIR3137-201ENST00000577367 75 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 MIR5192-201ENST00000579892 92 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC006967.3-201ENST00000594086 1093 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 PCNAP1-202ENST00000595299 752 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AL021918.1-201ENST00000603933 236 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC104237.3-201ENST00000611809 427 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC015660.5-201ENST00000623238 564 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AL034408.1-201ENST00000637712 664 ntBASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRAIPQ9BWF2 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms