Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX3Q99909 PGBD4P1-201ENST00000473644 407 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AC095057.1-201ENST00000507583 168 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX3Q99909 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.91□□□□□ -1.46
SSX3Q99909 GCSHP1-201ENST00000512554 484 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
SSX3Q99909 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.91□□□□□ -1.46
SSX3Q99909 CRADD-210ENST00000552033 622 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX3Q99909 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX3Q99909 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX3Q99909 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX3Q99909 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX3Q99909 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX3Q99909 AC097376.1-201ENST00000602907 997 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AC024085.1-201ENST00000604299 432 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AC087468.1-201ENST00000604365 630 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AC012510.1-201ENST00000607946 759 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX3Q99909 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 JAML-213ENST00000640745 951 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSX3Q99909 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSX3Q99909 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 CR383656.5-201ENST00000547616 1340 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
SSX3Q99909 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
SSX3Q99909 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SSX3Q99909 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX3Q99909 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX3Q99909 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX3Q99909 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SSX3Q99909 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 MIR431-201ENST00000385266 114 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC090114.1-201ENST00000393266 448 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 NPM1P31-201ENST00000399021 764 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 RNA5SP177-201ENST00000410122 107 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX3Q99909 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX3Q99909 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 REG1CP-206ENST00000447469 496 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX3Q99909 RHEBP1-201ENST00000448647 556 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 IGKV1OR2-2-201ENST00000451163 355 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC019080.2-201ENST00000453859 394 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC040975.1-201ENST00000472104 316 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 OR7E163P-201ENST00000505943 894 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC008496.1-201ENST00000509131 295 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 OR5F2P-201ENST00000532761 941 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
SSX3Q99909 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.9□□□□□ -1.46
SSX3Q99909 HMGN2P47-201ENST00000559378 272 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX3Q99909 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX3Q99909 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX3Q99909 AC010547.7-201ENST00000570323 333 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX3Q99909 AC122710.3-201ENST00000606566 541 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AL352984.2-202ENST00000613699 155 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC098590.2-201ENST00000614787 281 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX3Q99909 U1.41-201ENST00000617626 165 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC211433.3-201ENST00000623770 375 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC022743.1-201ENST00000624990 664 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.9□□□□□ -1.46
SSX3Q99909 AC138627.1-204ENST00000641894 765 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 AC140479.2-201ENST00000421567 3130 ntBASIC5.9□□□□□ -1.46
SSX3Q99909 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SSX3Q99909 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC5.9□□□□□ -1.47
SSX3Q99909 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SSX3Q99909 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
SSX3Q99909 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SSX3Q99909 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 AC009779.8-201ENST00000641684 4384 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms